Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC32.75■■■□□ 2.83
ABCA6Q8N139 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC32.75■■■□□ 2.83
ABCA6Q8N139 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC32.75■■■□□ 2.83
ABCA6Q8N139 AC133041.1-202ENST00000642053 222 ntBASIC32.75■■■□□ 2.83
ABCA6Q8N139 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC32.75■■■□□ 2.83
ABCA6Q8N139 MFF-207ENST00000409565 1548 ntTSL 2 BASIC32.75■■■□□ 2.83
ABCA6Q8N139 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
ABCA6Q8N139 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC32.74■■■□□ 2.83
ABCA6Q8N139 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
ABCA6Q8N139 PRORSD1P-201ENST00000295112 541 ntBASIC32.74■■■□□ 2.83
ABCA6Q8N139 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC32.74■■■□□ 2.83
ABCA6Q8N139 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC32.74■■■□□ 2.83
ABCA6Q8N139 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC32.74■■■□□ 2.83
ABCA6Q8N139 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC32.74■■■□□ 2.83
ABCA6Q8N139 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
ABCA6Q8N139 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC32.73■■■□□ 2.83
ABCA6Q8N139 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ABCA6Q8N139 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ABCA6Q8N139 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC32.73■■■□□ 2.83
ABCA6Q8N139 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
ABCA6Q8N139 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC32.73■■■□□ 2.83
ABCA6Q8N139 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
ABCA6Q8N139 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC32.72■■■□□ 2.83
ABCA6Q8N139 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC32.72■■■□□ 2.83
ABCA6Q8N139 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ABCA6Q8N139 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ABCA6Q8N139 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC32.72■■■□□ 2.83
ABCA6Q8N139 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC32.72■■■□□ 2.83
ABCA6Q8N139 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC32.72■■■□□ 2.83
ABCA6Q8N139 SLC7A5P1-201ENST00000568957 537 ntBASIC32.72■■■□□ 2.83
ABCA6Q8N139 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC32.72■■■□□ 2.83
ABCA6Q8N139 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
ABCA6Q8N139 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC32.72■■■□□ 2.83
ABCA6Q8N139 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC32.72■■■□□ 2.83
ABCA6Q8N139 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA6Q8N139 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA6Q8N139 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA6Q8N139 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA6Q8N139 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA6Q8N139 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC32.71■■■□□ 2.83
ABCA6Q8N139 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC32.71■■■□□ 2.83
ABCA6Q8N139 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC32.71■■■□□ 2.83
ABCA6Q8N139 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC32.71■■■□□ 2.83
ABCA6Q8N139 PXK-203ENST00000383715 1756 ntTSL 5 BASIC32.71■■■□□ 2.83
ABCA6Q8N139 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
ABCA6Q8N139 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
ABCA6Q8N139 AC010141.2-201ENST00000452426 721 ntBASIC32.7■■■□□ 2.83
ABCA6Q8N139 AC105036.2-201ENST00000569468 176 ntBASIC32.7■■■□□ 2.83
ABCA6Q8N139 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC32.7■■■□□ 2.83
ABCA6Q8N139 AC010536.3-201ENST00000620306 533 ntBASIC32.7■■■□□ 2.83
ABCA6Q8N139 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
ABCA6Q8N139 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
ABCA6Q8N139 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.82
ABCA6Q8N139 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
ABCA6Q8N139 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
ABCA6Q8N139 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC32.69■■■□□ 2.82
ABCA6Q8N139 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC32.69■■■□□ 2.82
ABCA6Q8N139 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC32.69■■■□□ 2.82
ABCA6Q8N139 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
ABCA6Q8N139 RNA5SP413-201ENST00000516373 109 ntBASIC32.69■■■□□ 2.82
ABCA6Q8N139 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC32.69■■■□□ 2.82
ABCA6Q8N139 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
ABCA6Q8N139 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ABCA6Q8N139 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC32.68■■■□□ 2.82
ABCA6Q8N139 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ABCA6Q8N139 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC32.68■■■□□ 2.82
ABCA6Q8N139 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
ABCA6Q8N139 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
ABCA6Q8N139 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC32.68■■■□□ 2.82
ABCA6Q8N139 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC32.67■■■□□ 2.82
ABCA6Q8N139 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC32.67■■■□□ 2.82
ABCA6Q8N139 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC32.67■■■□□ 2.82
ABCA6Q8N139 SERP1-208ENST00000491660 830 ntTSL 2 BASIC32.67■■■□□ 2.82
ABCA6Q8N139 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC32.67■■■□□ 2.82
ABCA6Q8N139 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC32.66■■■□□ 2.82
ABCA6Q8N139 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC32.66■■■□□ 2.82
ABCA6Q8N139 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC32.66■■■□□ 2.82
ABCA6Q8N139 AP001160.3-201ENST00000601484 763 ntBASIC32.66■■■□□ 2.82
ABCA6Q8N139 AC009237.3-201ENST00000393279 1427 ntBASIC32.66■■■□□ 2.82
ABCA6Q8N139 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC32.66■■■□□ 2.82
ABCA6Q8N139 RARRES2P4-201ENST00000514074 484 ntBASIC32.66■■■□□ 2.82
ABCA6Q8N139 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
ABCA6Q8N139 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
ABCA6Q8N139 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA6Q8N139 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA6Q8N139 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA6Q8N139 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC32.65■■■□□ 2.82
ABCA6Q8N139 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC32.65■■■□□ 2.82
ABCA6Q8N139 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC32.65■■■□□ 2.82
ABCA6Q8N139 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA6Q8N139 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC32.65■■■□□ 2.82
ABCA6Q8N139 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
ABCA6Q8N139 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
ABCA6Q8N139 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
ABCA6Q8N139 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC32.64■■■□□ 2.81
ABCA6Q8N139 PHB2-213ENST00000546111 858 ntTSL 2 BASIC32.63■■■□□ 2.81
ABCA6Q8N139 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC32.63■■■□□ 2.81
ABCA6Q8N139 AC083880.1-201ENST00000608266 535 ntBASIC32.63■■■□□ 2.81
ABCA6Q8N139 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC32.63■■■□□ 2.81
ABCA6Q8N139 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms