Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.24■□□□□ 0.67
LINC00346Q8IVM7 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 SRD5A1P1-201ENST00000442297 786 ntBASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 AL512631.2-201ENST00000604634 923 ntBASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
LINC00346Q8IVM7 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 FBXW4P1-201ENST00000426721 2239 ntBASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
LINC00346Q8IVM7 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00346Q8IVM7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 CA15P2-201ENST00000611168 834 ntBASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00346Q8IVM7 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00346Q8IVM7 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
LINC00346Q8IVM7 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00346Q8IVM7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.19■□□□□ 0.66
LINC00346Q8IVM7 MIR3181-201ENST00000578512 73 ntBASIC19.19■□□□□ 0.66
LINC00346Q8IVM7 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
LINC00346Q8IVM7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.19■□□□□ 0.66
LINC00346Q8IVM7 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00346Q8IVM7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 MIR4466-201ENST00000606121 54 ntBASIC19.17■□□□□ 0.66
LINC00346Q8IVM7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms