Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RAB11FIP1Q6WKZ4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
RAB11FIP1Q6WKZ4 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
RAB11FIP1Q6WKZ4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB11FIP1Q6WKZ4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.9■■□□□ 1.1
RAB11FIP1Q6WKZ4 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.9■■□□□ 1.1
RAB11FIP1Q6WKZ4 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.89■■□□□ 1.1
RAB11FIP1Q6WKZ4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAB11FIP1Q6WKZ4 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
RAB11FIP1Q6WKZ4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAB11FIP1Q6WKZ4 TPRG1LP1-201ENST00000598702 760 ntBASIC21.89■■□□□ 1.09
RAB11FIP1Q6WKZ4 AL137784.2-201ENST00000607332 1000 ntBASIC21.89■■□□□ 1.09
RAB11FIP1Q6WKZ4 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
RAB11FIP1Q6WKZ4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAB11FIP1Q6WKZ4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
RAB11FIP1Q6WKZ4 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
RAB11FIP1Q6WKZ4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
RAB11FIP1Q6WKZ4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 AC092437.1-201ENST00000624794 1048 ntBASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.86■■□□□ 1.09
RAB11FIP1Q6WKZ4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
RAB11FIP1Q6WKZ4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 AC004911.1-201ENST00000416316 871 ntBASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
RAB11FIP1Q6WKZ4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAB11FIP1Q6WKZ4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RAB11FIP1Q6WKZ4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.83■■□□□ 1.09
RAB11FIP1Q6WKZ4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
RAB11FIP1Q6WKZ4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RAB11FIP1Q6WKZ4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.83■■□□□ 1.09
RAB11FIP1Q6WKZ4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.83■■□□□ 1.09
RAB11FIP1Q6WKZ4 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms