Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC23.34■■□□□ 1.33
DCLRE1AQ6PJP8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
DCLRE1AQ6PJP8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DCLRE1AQ6PJP8 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC23.34■■□□□ 1.33
DCLRE1AQ6PJP8 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
DCLRE1AQ6PJP8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
DCLRE1AQ6PJP8 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC23.33■■□□□ 1.33
DCLRE1AQ6PJP8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
DCLRE1AQ6PJP8 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.33■■□□□ 1.33
DCLRE1AQ6PJP8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
DCLRE1AQ6PJP8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC23.33■■□□□ 1.33
DCLRE1AQ6PJP8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC23.33■■□□□ 1.33
DCLRE1AQ6PJP8 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
DCLRE1AQ6PJP8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.33■■□□□ 1.32
DCLRE1AQ6PJP8 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.33■■□□□ 1.32
DCLRE1AQ6PJP8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
DCLRE1AQ6PJP8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 AC004911.1-201ENST00000416316 871 ntBASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.31■■□□□ 1.32
DCLRE1AQ6PJP8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 LINC01960-201ENST00000563759 1884 ntBASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
DCLRE1AQ6PJP8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 COX20-201ENST00000366528 568 ntTSL 2 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
DCLRE1AQ6PJP8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 ID1-201ENST00000376105 1233 ntBASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 AC079089.2-201ENST00000531211 1277 ntBASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 GALNS-213ENST00000569433 723 ntTSL 3 BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 KRT18P61-201ENST00000585825 1298 ntBASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 CPT2-209ENST00000636935 803 ntTSL 5 BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 AP004607.4-201ENST00000530158 1459 ntBASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.28■■□□□ 1.32
DCLRE1AQ6PJP8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 DLX3-202ENST00000512495 834 ntTSL 2 BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.27■■□□□ 1.32
DCLRE1AQ6PJP8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
DCLRE1AQ6PJP8 AC009237.3-201ENST00000393279 1427 ntBASIC23.25■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms