Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 AL356740.2-201ENST00000601559 647 ntBASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.75■□□□□ 0.75
TMEM53Q6P2H8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.74■□□□□ 0.75
TMEM53Q6P2H8 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TMEM53Q6P2H8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TMEM53Q6P2H8 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.71■□□□□ 0.75
TMEM53Q6P2H8 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TMEM53Q6P2H8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 AL117332.1-201ENST00000622628 974 ntBASIC19.69■□□□□ 0.74
TMEM53Q6P2H8 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms