Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
REEP3Q6NUK4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
REEP3Q6NUK4 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
REEP3Q6NUK4 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.27■□□□□ 0.84
REEP3Q6NUK4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
REEP3Q6NUK4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
REEP3Q6NUK4 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
REEP3Q6NUK4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.27■□□□□ 0.83
REEP3Q6NUK4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.26■□□□□ 0.83
REEP3Q6NUK4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.25■□□□□ 0.83
REEP3Q6NUK4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.25■□□□□ 0.83
REEP3Q6NUK4 FAM99A-202ENST00000538190 1989 ntBASIC20.25■□□□□ 0.83
REEP3Q6NUK4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 KRT16P3-201ENST00000439127 1283 ntBASIC20.24■□□□□ 0.83
REEP3Q6NUK4 AK3-203ENST00000447596 705 ntTSL 2 BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
REEP3Q6NUK4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
REEP3Q6NUK4 AL137060.1-201ENST00000618151 2648 ntBASIC20.23■□□□□ 0.83
REEP3Q6NUK4 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.22■□□□□ 0.83
REEP3Q6NUK4 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.22■□□□□ 0.83
REEP3Q6NUK4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
REEP3Q6NUK4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
REEP3Q6NUK4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
REEP3Q6NUK4 AC133637.1-201ENST00000624115 1537 ntBASIC20.22■□□□□ 0.83
REEP3Q6NUK4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
REEP3Q6NUK4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
REEP3Q6NUK4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
REEP3Q6NUK4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
REEP3Q6NUK4 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
REEP3Q6NUK4 AL031602.1-201ENST00000633169 911 ntBASIC20.2■□□□□ 0.82
REEP3Q6NUK4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
REEP3Q6NUK4 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.2■□□□□ 0.82
REEP3Q6NUK4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
REEP3Q6NUK4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.19■□□□□ 0.82
REEP3Q6NUK4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
REEP3Q6NUK4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
REEP3Q6NUK4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
REEP3Q6NUK4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
REEP3Q6NUK4 AC026310.3-201ENST00000625186 2373 ntBASIC20.19■□□□□ 0.82
REEP3Q6NUK4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.19■□□□□ 0.82
REEP3Q6NUK4 pRNA.6-201ENST00000610482 90 ntBASIC20.19■□□□□ 0.82
REEP3Q6NUK4 pRNA.5-201ENST00000612139 90 ntBASIC20.19■□□□□ 0.82
REEP3Q6NUK4 pRNA.11-201ENST00000618423 90 ntBASIC20.19■□□□□ 0.82
REEP3Q6NUK4 pRNA.13-201ENST00000619112 90 ntBASIC20.19■□□□□ 0.82
REEP3Q6NUK4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms