Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 AC009237.3-201ENST00000393279 1427 ntBASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
PTCRAQ6ISU1 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 MARS-234ENST00000630571 216 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 MARS-235ENST00000630803 183 ntTSL 3 BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
PTCRAQ6ISU1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
PTCRAQ6ISU1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCRAQ6ISU1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC22.7■■□□□ 1.22
PTCRAQ6ISU1 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC22.7■■□□□ 1.22
PTCRAQ6ISU1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCRAQ6ISU1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
PTCRAQ6ISU1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
PTCRAQ6ISU1 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC22.7■■□□□ 1.22
PTCRAQ6ISU1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
PTCRAQ6ISU1 DUSP8P4-201ENST00000399538 1761 ntBASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 AC092118.2-201ENST00000613495 667 ntBASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
PTCRAQ6ISU1 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 CYP2T1P-201ENST00000432607 1285 ntBASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 AC006058.3-201ENST00000606217 1069 ntBASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 AC013268.1-206ENST00000638368 961 ntBASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 AC112229.1-201ENST00000639295 961 ntBASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PTCRAQ6ISU1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 AC135731.1-201ENST00000569415 2548 ntBASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PTCRAQ6ISU1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 UNC93B4-201ENST00000505679 747 ntBASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PTCRAQ6ISU1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC22.64■■□□□ 1.22
PTCRAQ6ISU1 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
PTCRAQ6ISU1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PTCRAQ6ISU1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PTCRAQ6ISU1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC22.64■■□□□ 1.21
PTCRAQ6ISU1 AC128676.1-201ENST00000454392 318 ntBASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms