Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 TSPY26P-201ENST00000476365 1326 ntBASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.25■□□□□ 0.83
HLA-DQA1Q5Y7H0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 ESRRAP2-201ENST00000418437 1549 ntBASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 C1orf229-201ENST00000623686 2258 ntBASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
HLA-DQA1Q5Y7H0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
HLA-DQA1Q5Y7H0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 AC105265.2-201ENST00000467189 838 ntBASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
HLA-DQA1Q5Y7H0 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.21■□□□□ 0.83
HLA-DQA1Q5Y7H0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 AC019069.1-201ENST00000610008 1333 ntBASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.2■□□□□ 0.82
HLA-DQA1Q5Y7H0 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 AC068473.5-201ENST00000616428 2072 ntBASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HLA-DQA1Q5Y7H0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.18■□□□□ 0.82
HLA-DQA1Q5Y7H0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HLA-DQA1Q5Y7H0 OXCT2P1-201ENST00000447263 1535 ntBASIC20.18■□□□□ 0.82
HLA-DQA1Q5Y7H0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
HLA-DQA1Q5Y7H0 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
HLA-DQA1Q5Y7H0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HLA-DQA1Q5Y7H0 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HLA-DQA1Q5Y7H0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC20.18■□□□□ 0.82
HLA-DQA1Q5Y7H0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms