Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
TRIM60Q495X7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.12■■□□□ 1.45
TRIM60Q495X7 POU5F1P3-201ENST00000428824 1078 ntBASIC24.12■■□□□ 1.45
TRIM60Q495X7 CNN2P6-201ENST00000439038 900 ntBASIC24.12■■□□□ 1.45
TRIM60Q495X7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.12■■□□□ 1.45
TRIM60Q495X7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM60Q495X7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC24.12■■□□□ 1.45
TRIM60Q495X7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM60Q495X7 AC079630.1-202ENST00000618127 1840 ntBASIC24.12■■□□□ 1.45
TRIM60Q495X7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
TRIM60Q495X7 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM60Q495X7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM60Q495X7 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM60Q495X7 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM60Q495X7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM60Q495X7 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM60Q495X7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
TRIM60Q495X7 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC24.11■■□□□ 1.45
TRIM60Q495X7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM60Q495X7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM60Q495X7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM60Q495X7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
TRIM60Q495X7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.1■■□□□ 1.45
TRIM60Q495X7 AP001160.3-201ENST00000601484 763 ntBASIC24.1■■□□□ 1.45
TRIM60Q495X7 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM60Q495X7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
TRIM60Q495X7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM60Q495X7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM60Q495X7 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC24.09■■□□□ 1.45
TRIM60Q495X7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM60Q495X7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
TRIM60Q495X7 ITM2C-210ENST00000620962 501 ntBASIC24.09■■□□□ 1.45
TRIM60Q495X7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM60Q495X7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.09■■□□□ 1.45
TRIM60Q495X7 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM60Q495X7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
TRIM60Q495X7 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC24.09■■□□□ 1.45
TRIM60Q495X7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
TRIM60Q495X7 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM60Q495X7 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM60Q495X7 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM60Q495X7 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM60Q495X7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
TRIM60Q495X7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM60Q495X7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
TRIM60Q495X7 AC133552.2-202ENST00000575694 574 ntBASIC24.08■■□□□ 1.45
TRIM60Q495X7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
TRIM60Q495X7 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.08■■□□□ 1.45
TRIM60Q495X7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.08■■□□□ 1.45
TRIM60Q495X7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC24.08■■□□□ 1.45
TRIM60Q495X7 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC24.08■■□□□ 1.45
TRIM60Q495X7 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.44
TRIM60Q495X7 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 KRT18P29-201ENST00000397031 1267 ntBASIC24.07■■□□□ 1.44
TRIM60Q495X7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 ARL16-209ENST00000573715 763 ntTSL 3 BASIC24.07■■□□□ 1.44
TRIM60Q495X7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 ARL16-211ENST00000576135 694 ntTSL 3 BASIC24.07■■□□□ 1.44
TRIM60Q495X7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC24.07■■□□□ 1.44
TRIM60Q495X7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 AC009237.3-201ENST00000393279 1427 ntBASIC24.07■■□□□ 1.44
TRIM60Q495X7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
TRIM60Q495X7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM60Q495X7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM60Q495X7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM60Q495X7 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.06■■□□□ 1.44
TRIM60Q495X7 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC24.06■■□□□ 1.44
TRIM60Q495X7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.06■■□□□ 1.44
TRIM60Q495X7 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.06■■□□□ 1.44
TRIM60Q495X7 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM60Q495X7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM60Q495X7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
TRIM60Q495X7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM60Q495X7 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM60Q495X7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM60Q495X7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM60Q495X7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.05■■□□□ 1.44
TRIM60Q495X7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM60Q495X7 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.05■■□□□ 1.44
TRIM60Q495X7 RNA5SP413-201ENST00000516373 109 ntBASIC24.05■■□□□ 1.44
TRIM60Q495X7 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.05■■□□□ 1.44
TRIM60Q495X7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM60Q495X7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM60Q495X7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TRIM60Q495X7 PRORSD1P-201ENST00000295112 541 ntBASIC24.04■■□□□ 1.44
TRIM60Q495X7 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM60Q495X7 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC24.04■■□□□ 1.44
TRIM60Q495X7 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms