Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 AC005224.4-201ENST00000583262 1652 ntBASIC26.29■■□□□ 1.8
PDS5AQ29RF7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
PDS5AQ29RF7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDS5AQ29RF7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.28■■□□□ 1.8
PDS5AQ29RF7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC26.28■■□□□ 1.8
PDS5AQ29RF7 GALNS-213ENST00000569433 723 ntTSL 3 BASIC26.28■■□□□ 1.8
PDS5AQ29RF7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDS5AQ29RF7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDS5AQ29RF7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDS5AQ29RF7 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
PDS5AQ29RF7 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDS5AQ29RF7 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.27■■□□□ 1.8
PDS5AQ29RF7 GXYLT1P2-201ENST00000433312 1230 ntBASIC26.27■■□□□ 1.8
PDS5AQ29RF7 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PDS5AQ29RF7 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC26.27■■□□□ 1.8
PDS5AQ29RF7 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.27■■□□□ 1.8
PDS5AQ29RF7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PDS5AQ29RF7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
PDS5AQ29RF7 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.26■■□□□ 1.79
PDS5AQ29RF7 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
PDS5AQ29RF7 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
PDS5AQ29RF7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDS5AQ29RF7 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
PDS5AQ29RF7 AC004854.2-201ENST00000608450 1441 ntBASIC26.26■■□□□ 1.79
PDS5AQ29RF7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PDS5AQ29RF7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
PDS5AQ29RF7 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.25■■□□□ 1.79
PDS5AQ29RF7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
PDS5AQ29RF7 AC006015.1-201ENST00000429970 570 ntBASIC26.25■■□□□ 1.79
PDS5AQ29RF7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC26.25■■□□□ 1.79
PDS5AQ29RF7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC26.25■■□□□ 1.79
PDS5AQ29RF7 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDS5AQ29RF7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PDS5AQ29RF7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDS5AQ29RF7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
PDS5AQ29RF7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDS5AQ29RF7 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC26.24■■□□□ 1.79
PDS5AQ29RF7 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
PDS5AQ29RF7 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.24■■□□□ 1.79
PDS5AQ29RF7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.24■■□□□ 1.79
PDS5AQ29RF7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.24■■□□□ 1.79
PDS5AQ29RF7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDS5AQ29RF7 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PDS5AQ29RF7 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.23■■□□□ 1.79
PDS5AQ29RF7 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.23■■□□□ 1.79
PDS5AQ29RF7 RARRES2P11-201ENST00000635158 484 ntBASIC26.23■■□□□ 1.79
PDS5AQ29RF7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
PDS5AQ29RF7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.23■■□□□ 1.79
PDS5AQ29RF7 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
PDS5AQ29RF7 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC26.23■■□□□ 1.79
PDS5AQ29RF7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 AC079140.4-201ENST00000507448 529 ntBASIC26.22■■□□□ 1.79
PDS5AQ29RF7 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 NFE2L3P1-201ENST00000588207 1959 ntBASIC26.22■■□□□ 1.79
PDS5AQ29RF7 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
PDS5AQ29RF7 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PDS5AQ29RF7 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PDS5AQ29RF7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.2■■□□□ 1.79
PDS5AQ29RF7 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC26.2■■□□□ 1.79
PDS5AQ29RF7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.2■■□□□ 1.79
PDS5AQ29RF7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
PDS5AQ29RF7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC26.2■■□□□ 1.79
PDS5AQ29RF7 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
PDS5AQ29RF7 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC26.2■■□□□ 1.79
PDS5AQ29RF7 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDS5AQ29RF7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PDS5AQ29RF7 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
PDS5AQ29RF7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDS5AQ29RF7 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PDS5AQ29RF7 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.19■■□□□ 1.78
PDS5AQ29RF7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms