Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
NKX6-1P78426 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NKX6-1P78426 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
NKX6-1P78426 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
NKX6-1P78426 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX6-1P78426 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.07■□□□□ 0.64
NKX6-1P78426 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.07■□□□□ 0.64
NKX6-1P78426 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.07■□□□□ 0.64
NKX6-1P78426 NTF6G-201ENST00000591094 616 ntBASIC19.07■□□□□ 0.64
NKX6-1P78426 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.07■□□□□ 0.64
NKX6-1P78426 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
NKX6-1P78426 AC068473.5-201ENST00000616428 2072 ntBASIC19.07■□□□□ 0.64
NKX6-1P78426 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.07■□□□□ 0.64
NKX6-1P78426 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NKX6-1P78426 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NKX6-1P78426 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.06■□□□□ 0.64
NKX6-1P78426 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
NKX6-1P78426 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
NKX6-1P78426 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 MIR572-201ENST00000384983 95 ntBASIC19.06■□□□□ 0.64
NKX6-1P78426 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.06■□□□□ 0.64
NKX6-1P78426 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX6-1P78426 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX6-1P78426 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX6-1P78426 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX6-1P78426 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
NKX6-1P78426 AL354811.1-201ENST00000610286 706 ntBASIC19.06■□□□□ 0.64
NKX6-1P78426 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.06■□□□□ 0.64
NKX6-1P78426 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.06■□□□□ 0.64
NKX6-1P78426 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NKX6-1P78426 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.05■□□□□ 0.64
NKX6-1P78426 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.05■□□□□ 0.64
NKX6-1P78426 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
NKX6-1P78426 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NKX6-1P78426 IGHV3-19-201ENST00000521488 291 ntBASIC19.05■□□□□ 0.64
NKX6-1P78426 AC012414.1-201ENST00000556676 535 ntBASIC19.05■□□□□ 0.64
NKX6-1P78426 CCDC92B-201ENST00000575506 885 ntBASIC19.05■□□□□ 0.64
NKX6-1P78426 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NKX6-1P78426 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
NKX6-1P78426 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.04■□□□□ 0.64
NKX6-1P78426 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NKX6-1P78426 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.04■□□□□ 0.64
NKX6-1P78426 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.04■□□□□ 0.64
NKX6-1P78426 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
NKX6-1P78426 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NKX6-1P78426 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.04■□□□□ 0.64
NKX6-1P78426 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
NKX6-1P78426 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
NKX6-1P78426 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.03■□□□□ 0.64
NKX6-1P78426 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-1P78426 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.03■□□□□ 0.64
NKX6-1P78426 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.03■□□□□ 0.64
NKX6-1P78426 AC010525.1-201ENST00000585559 441 ntBASIC19.03■□□□□ 0.64
NKX6-1P78426 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.03■□□□□ 0.64
NKX6-1P78426 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
NKX6-1P78426 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.03■□□□□ 0.64
NKX6-1P78426 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-1P78426 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
NKX6-1P78426 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-1P78426 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
NKX6-1P78426 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
NKX6-1P78426 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-1P78426 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
NKX6-1P78426 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.02■□□□□ 0.64
NKX6-1P78426 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-1P78426 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
NKX6-1P78426 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms