Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.62■□□□□ 0.41
SPCS3P61009 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.62■□□□□ 0.41
SPCS3P61009 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.62■□□□□ 0.41
SPCS3P61009 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPCS3P61009 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPCS3P61009 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPCS3P61009 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPCS3P61009 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.61■□□□□ 0.41
SPCS3P61009 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC17.61■□□□□ 0.41
SPCS3P61009 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SPCS3P61009 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.61■□□□□ 0.41
SPCS3P61009 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.61■□□□□ 0.41
SPCS3P61009 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SPCS3P61009 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC17.61■□□□□ 0.41
SPCS3P61009 AC103834.1-201ENST00000520383 144 ntBASIC17.61■□□□□ 0.41
SPCS3P61009 DUX4L4-201ENST00000566884 1269 ntBASIC17.61■□□□□ 0.41
SPCS3P61009 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.61■□□□□ 0.41
SPCS3P61009 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC17.61■□□□□ 0.41
SPCS3P61009 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SPCS3P61009 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SPCS3P61009 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SPCS3P61009 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPCS3P61009 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SPCS3P61009 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS3P61009 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SPCS3P61009 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS3P61009 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS3P61009 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.6■□□□□ 0.41
SPCS3P61009 AC103724.3-201ENST00000564481 992 ntBASIC17.6■□□□□ 0.41
SPCS3P61009 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SPCS3P61009 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS3P61009 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS3P61009 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC17.6■□□□□ 0.41
SPCS3P61009 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.6■□□□□ 0.41
SPCS3P61009 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS3P61009 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPCS3P61009 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS3P61009 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS3P61009 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS3P61009 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.59■□□□□ 0.41
SPCS3P61009 ASB1-202ENST00000409297 878 ntTSL 5 BASIC17.59■□□□□ 0.41
SPCS3P61009 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS3P61009 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS3P61009 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS3P61009 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS3P61009 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPCS3P61009 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC17.59■□□□□ 0.41
SPCS3P61009 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPCS3P61009 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SPCS3P61009 AL137060.1-201ENST00000618151 2648 ntBASIC17.58■□□□□ 0.41
SPCS3P61009 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.58■□□□□ 0.41
SPCS3P61009 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SPCS3P61009 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SPCS3P61009 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.58■□□□□ 0.4
SPCS3P61009 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.58■□□□□ 0.4
SPCS3P61009 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SPCS3P61009 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC17.58■□□□□ 0.4
SPCS3P61009 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.58■□□□□ 0.4
SPCS3P61009 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.58■□□□□ 0.4
SPCS3P61009 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.58■□□□□ 0.4
SPCS3P61009 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC17.58■□□□□ 0.4
SPCS3P61009 AC012354.3-201ENST00000623734 483 ntBASIC17.58■□□□□ 0.4
SPCS3P61009 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SPCS3P61009 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SPCS3P61009 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.57■□□□□ 0.4
SPCS3P61009 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.57■□□□□ 0.4
SPCS3P61009 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SPCS3P61009 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.57■□□□□ 0.4
SPCS3P61009 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
SPCS3P61009 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SPCS3P61009 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SPCS3P61009 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SPCS3P61009 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SPCS3P61009 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms