Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL121832.2-201ENST00000610979 668 ntBASIC20.99■□□□□ 0.95
CLDN6P56747 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.99■□□□□ 0.95
CLDN6P56747 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN6P56747 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN6P56747 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CLDN6P56747 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
CLDN6P56747 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN6P56747 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.98■□□□□ 0.95
CLDN6P56747 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN6P56747 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN6P56747 TSPY6P-201ENST00000448518 926 ntBASIC20.98■□□□□ 0.95
CLDN6P56747 KRT18P6-201ENST00000555540 1265 ntBASIC20.98■□□□□ 0.95
CLDN6P56747 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN6P56747 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN6P56747 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN6P56747 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN6P56747 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN6P56747 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN6P56747 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN6P56747 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDN6P56747 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN6P56747 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CLDN6P56747 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.97■□□□□ 0.95
CLDN6P56747 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN6P56747 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN6P56747 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDN6P56747 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN6P56747 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN6P56747 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN6P56747 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN6P56747 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN6P56747 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN6P56747 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN6P56747 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN6P56747 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLDN6P56747 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN6P56747 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN6P56747 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN6P56747 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN6P56747 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN6P56747 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN6P56747 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN6P56747 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN6P56747 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN6P56747 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN6P56747 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN6P56747 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN6P56747 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN6P56747 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.95■□□□□ 0.94
CLDN6P56747 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN6P56747 UBE2DNL-204ENST00000602536 740 ntBASIC20.95■□□□□ 0.94
CLDN6P56747 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN6P56747 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN6P56747 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN6P56747 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN6P56747 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN6P56747 AL353803.4-201ENST00000565882 1934 ntBASIC20.94■□□□□ 0.94
CLDN6P56747 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.94■□□□□ 0.94
CLDN6P56747 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
CLDN6P56747 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.94■□□□□ 0.94
CLDN6P56747 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.94■□□□□ 0.94
CLDN6P56747 SLC7A5P2-201ENST00000553010 536 ntBASIC20.94■□□□□ 0.94
CLDN6P56747 DUX4L16-201ENST00000555130 1264 ntBASIC20.94■□□□□ 0.94
CLDN6P56747 AC098934.4-201ENST00000564127 592 ntBASIC20.94■□□□□ 0.94
CLDN6P56747 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.94■□□□□ 0.94
CLDN6P56747 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLDN6P56747 AC005181.1-201ENST00000604782 1256 ntBASIC20.94■□□□□ 0.94
CLDN6P56747 AC087239.1-201ENST00000622671 572 ntBASIC20.94■□□□□ 0.94
CLDN6P56747 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN6P56747 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN6P56747 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN6P56747 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN6P56747 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN6P56747 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN6P56747 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.93■□□□□ 0.94
CLDN6P56747 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN6P56747 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CLDN6P56747 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CLDN6P56747 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN6P56747 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN6P56747 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.93■□□□□ 0.94
CLDN6P56747 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN6P56747 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLDN6P56747 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN6P56747 AC142381.3-201ENST00000568208 1670 ntBASIC20.93■□□□□ 0.94
CLDN6P56747 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN6P56747 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN6P56747 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.92■□□□□ 0.94
CLDN6P56747 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN6P56747 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN6P56747 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN6P56747 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN6P56747 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN6P56747 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN6P56747 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN6P56747 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.91■□□□□ 0.94
CLDN6P56747 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLDN6P56747 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.91■□□□□ 0.94
CLDN6P56747 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CLDN6P56747 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms