Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.61■□□□□ 0.89
PRIM2P49643 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
PRIM2P49643 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20.61■□□□□ 0.89
PRIM2P49643 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.61■□□□□ 0.89
PRIM2P49643 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PRIM2P49643 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PRIM2P49643 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.61■□□□□ 0.89
PRIM2P49643 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRIM2P49643 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PRIM2P49643 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRIM2P49643 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PRIM2P49643 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.6■□□□□ 0.89
PRIM2P49643 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRIM2P49643 LINC01960-201ENST00000563759 1884 ntBASIC20.6■□□□□ 0.89
PRIM2P49643 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.59■□□□□ 0.89
PRIM2P49643 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
PRIM2P49643 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.59■□□□□ 0.89
PRIM2P49643 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
PRIM2P49643 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.59■□□□□ 0.89
PRIM2P49643 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.59■□□□□ 0.89
PRIM2P49643 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.59■□□□□ 0.89
PRIM2P49643 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
PRIM2P49643 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRIM2P49643 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.59■□□□□ 0.89
PRIM2P49643 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRIM2P49643 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.58■□□□□ 0.89
PRIM2P49643 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRIM2P49643 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.58■□□□□ 0.89
PRIM2P49643 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRIM2P49643 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRIM2P49643 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
PRIM2P49643 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.58■□□□□ 0.89
PRIM2P49643 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.89
PRIM2P49643 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRIM2P49643 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
PRIM2P49643 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRIM2P49643 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRIM2P49643 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRIM2P49643 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRIM2P49643 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.58■□□□□ 0.88
PRIM2P49643 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRIM2P49643 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRIM2P49643 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.57■□□□□ 0.88
PRIM2P49643 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PRIM2P49643 AL499627.2-201ENST00000606283 725 ntBASIC20.57■□□□□ 0.88
PRIM2P49643 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRIM2P49643 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC20.57■□□□□ 0.88
PRIM2P49643 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.57■□□□□ 0.88
PRIM2P49643 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRIM2P49643 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRIM2P49643 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRIM2P49643 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRIM2P49643 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
PRIM2P49643 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRIM2P49643 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PRIM2P49643 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.56■□□□□ 0.88
PRIM2P49643 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.56■□□□□ 0.88
PRIM2P49643 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PRIM2P49643 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRIM2P49643 AC004687.1-201ENST00000579003 1625 ntBASIC20.56■□□□□ 0.88
PRIM2P49643 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.56■□□□□ 0.88
PRIM2P49643 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRIM2P49643 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRIM2P49643 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRIM2P49643 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.55■□□□□ 0.88
PRIM2P49643 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PRIM2P49643 SRD5A1P1-201ENST00000442297 786 ntBASIC20.55■□□□□ 0.88
PRIM2P49643 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.55■□□□□ 0.88
PRIM2P49643 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms