Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YHL012WYHL012W 1482 nt3.6□□□□□ -1.83
TDA11P38854 RTS1YOR014W 2274 nt3.59□□□□□ -1.83
TDA11P38854 GPI1YGR216C 1830 nt3.59□□□□□ -1.83
TDA11P38854 SNT1YCR033W 3681 nt3.59□□□□□ -1.83
TDA11P38854 FAP7YDL166C 594 nt3.59□□□□□ -1.83
TDA11P38854 NOP6YDL213C 678 nt3.59□□□□□ -1.83
TDA11P38854 DPH1YIL103W 1278 nt3.59□□□□□ -1.83
TDA11P38854 MPD1YOR288C 957 nt3.59□□□□□ -1.83
TDA11P38854 SPS2YDR522C 1509 nt3.59□□□□□ -1.84
TDA11P38854 ERG5YMR015C 1617 nt3.59□□□□□ -1.84
TDA11P38854 BAR1YIL015W 1764 nt3.58□□□□□ -1.84
TDA11P38854 YNR065CYNR065C 3351 nt3.58□□□□□ -1.84
TDA11P38854 MSW1YDR268W 1140 nt3.58□□□□□ -1.84
TDA11P38854 YDR282CYDR282C 1245 nt3.58□□□□□ -1.84
TDA11P38854 RPS18AYDR450W 441 nt3.58□□□□□ -1.84
TDA11P38854 BMH1YER177W 804 nt3.58□□□□□ -1.84
TDA11P38854 SDT1YGL224C 843 nt3.58□□□□□ -1.84
TDA11P38854 ARD1YHR013C 717 nt3.58□□□□□ -1.84
TDA11P38854 FUR1YHR128W 651 nt3.58□□□□□ -1.84
TDA11P38854 YHR173CYHR173C 339 nt3.58□□□□□ -1.84
TDA11P38854 YAL065CYAL065C 387 nt3.58□□□□□ -1.84
TDA11P38854 GCD7YLR291C 1146 nt3.58□□□□□ -1.84
TDA11P38854 YML053CYML053C 639 nt3.58□□□□□ -1.84
TDA11P38854 RIM11YMR139W 1113 nt3.58□□□□□ -1.84
TDA11P38854 MCK1YNL307C 1128 nt3.58□□□□□ -1.84
TDA11P38854 PRR2YDL214C 2100 nt3.58□□□□□ -1.84
TDA11P38854 YPR022CYPR022C 3402 nt3.57□□□□□ -1.84
TDA11P38854 YCL075WYCL075W 441 nt3.57□□□□□ -1.84
TDA11P38854 SPB4YFL002C 1821 nt3.57□□□□□ -1.84
TDA11P38854 ROK1YGL171W 1695 nt3.57□□□□□ -1.84
TDA11P38854 CLC1YGR167W 702 nt3.57□□□□□ -1.84
TDA11P38854 IGO2YHR132W-A 396 nt3.57□□□□□ -1.84
TDA11P38854 BAT2YJR148W 1131 nt3.57□□□□□ -1.84
TDA11P38854 GMH1YKR030W 822 nt3.57□□□□□ -1.84
TDA11P38854 YMR084WYMR084W 789 nt3.57□□□□□ -1.84
TDA11P38854 YOR338WYOR338W 1092 nt3.57□□□□□ -1.84
TDA11P38854 SUI3YPL237W 858 nt3.57□□□□□ -1.84
TDA11P38854 YPR108W-AYPR108W-A 213 nt3.57□□□□□ -1.84
TDA11P38854 YBR225WYBR225W 2703 nt3.57□□□□□ -1.84
TDA11P38854 ROD1YOR018W 2514 nt3.56□□□□□ -1.84
TDA11P38854 TGL1YKL140W 1647 nt3.56□□□□□ -1.84
TDA11P38854 YHI9YHR029C 885 nt3.56□□□□□ -1.84
TDA11P38854 GEP4YHR100C 558 nt3.56□□□□□ -1.84
TDA11P38854 YKL177WYKL177W 339 nt3.56□□□□□ -1.84
TDA11P38854 YLR049CYLR049C 1287 nt3.56□□□□□ -1.84
TDA11P38854 PSF3YOL146W 585 nt3.56□□□□□ -1.84
TDA11P38854 KIN4YOR233W 2403 nt3.56□□□□□ -1.84
TDA11P38854 SPO1YNL012W 1896 nt3.56□□□□□ -1.84
TDA11P38854 MCD4YKL165C 2760 nt3.56□□□□□ -1.84
TDA11P38854 AIP1YMR092C 1848 nt3.56□□□□□ -1.84
TDA11P38854 BYE1YKL005C 1785 nt3.56□□□□□ -1.84
TDA11P38854 MDM38YOL027C 1722 nt3.56□□□□□ -1.84
TDA11P38854 FAR8YMR029C 1572 nt3.55□□□□□ -1.84
TDA11P38854 PKH1YDR490C 2301 nt3.55□□□□□ -1.84
TDA11P38854 LTV1YKL143W 1392 nt3.55□□□□□ -1.84
TDA11P38854 SSL1YLR005W 1386 nt3.55□□□□□ -1.84
TDA11P38854 YCL068CYCL068C 783 nt3.55□□□□□ -1.84
TDA11P38854 ECO1YFR027W 846 nt3.55□□□□□ -1.84
TDA11P38854 PRX1YBL064C 786 nt3.55□□□□□ -1.84
TDA11P38854 RPL18AYOL120C 561 nt3.55□□□□□ -1.84
TDA11P38854 HMT1YBR034C 1047 nt3.55□□□□□ -1.84
TDA11P38854 USA1YML029W 2517 nt3.55□□□□□ -1.84
TDA11P38854 YEL025CYEL025C 3567 nt3.55□□□□□ -1.84
TDA11P38854 UBX5YDR330W 1503 nt3.54□□□□□ -1.84
TDA11P38854 SAS4YDR181C 1446 nt3.54□□□□□ -1.84
TDA11P38854 PAF1YBR279W 1338 nt3.54□□□□□ -1.84
TDA11P38854 AIM14YGL160W 1713 nt3.54□□□□□ -1.84
TDA11P38854 CDC8YJR057W 651 nt3.54□□□□□ -1.84
TDA11P38854 ENT3YJR125C 1227 nt3.54□□□□□ -1.84
TDA11P38854 MYO3YKL129C 3819 nt3.54□□□□□ -1.84
TDA11P38854 PAM18YLR008C 507 nt3.54□□□□□ -1.84
TDA11P38854 YLR225CYLR225C 1224 nt3.54□□□□□ -1.84
TDA11P38854 FLD1YLR404W 858 nt3.54□□□□□ -1.84
TDA11P38854 TMC1YOR052C 453 nt3.54□□□□□ -1.84
TDA11P38854 MET16YPR167C 786 nt3.54□□□□□ -1.84
TDA11P38854 CNS1YBR155W 1158 nt3.54□□□□□ -1.84
TDA11P38854 GCD1YOR260W 1737 nt3.53□□□□□ -1.84
TDA11P38854 NOG1YPL093W 1944 nt3.53□□□□□ -1.84
TDA11P38854 snR57snR57 88 nt3.53□□□□□ -1.84
TDA11P38854 BUD30YDL151C 582 nt3.53□□□□□ -1.84
TDA11P38854 USE1YGL098W 738 nt3.53□□□□□ -1.84
TDA11P38854 YKL162C-AYKL162C-A 153 nt3.53□□□□□ -1.84
TDA11P38854 ASI2YNL159C 870 nt3.53□□□□□ -1.84
TDA11P38854 YGR027W-BYGR027W-B 5268 nt3.53□□□□□ -1.84
TDA11P38854 YLR227W-BYLR227W-B 5268 nt3.53□□□□□ -1.84
TDA11P38854 YPR158C-DYPR158C-D 5268 nt3.53□□□□□ -1.84
TDA11P38854 TAF8YML114C 1533 nt3.53□□□□□ -1.84
TDA11P38854 URA2YJL130C 6645 nt3.52□□□□□ -1.85
TDA11P38854 SIP1YDR422C 2448 nt3.52□□□□□ -1.85
TDA11P38854 FLO9YAL063C 3969 nt3.52□□□□□ -1.85
TDA11P38854 SRO9YCL037C 1305 nt3.52□□□□□ -1.85
TDA11P38854 RPS8BYER102W 603 nt3.52□□□□□ -1.85
TDA11P38854 PUG1YER185W 912 nt3.52□□□□□ -1.85
TDA11P38854 YGL063C-AYGL063C-A 150 nt3.52□□□□□ -1.85
TDA11P38854 MRM2YGL136C 963 nt3.52□□□□□ -1.85
TDA11P38854 RSM25YIL093C 795 nt3.52□□□□□ -1.85
TDA11P38854 YKL071WYKL071W 771 nt3.52□□□□□ -1.85
TDA11P38854 RPS8AYBL072C 603 nt3.52□□□□□ -1.85
TDA11P38854 YNR071CYNR071C 1029 nt3.52□□□□□ -1.85
TDA11P38854 AIM39YOL053W 1188 nt3.52□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 17.4 ms