Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.06■□□□□ 0.8
ABCD3P28288 IRS3P-201ENST00000223076 1006 ntBASIC20.06■□□□□ 0.8
ABCD3P28288 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.06■□□□□ 0.8
ABCD3P28288 MIR572-201ENST00000384983 95 ntBASIC20.06■□□□□ 0.8
ABCD3P28288 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ABCD3P28288 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.06■□□□□ 0.8
ABCD3P28288 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ABCD3P28288 AC133561.1-201ENST00000568600 2415 ntBASIC20.06■□□□□ 0.8
ABCD3P28288 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCD3P28288 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ABCD3P28288 AC137767.1-201ENST00000602918 1920 ntBASIC20.06■□□□□ 0.8
ABCD3P28288 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ABCD3P28288 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.05■□□□□ 0.8
ABCD3P28288 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.05■□□□□ 0.8
ABCD3P28288 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.05■□□□□ 0.8
ABCD3P28288 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ABCD3P28288 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ABCD3P28288 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCD3P28288 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCD3P28288 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.04■□□□□ 0.8
ABCD3P28288 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCD3P28288 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCD3P28288 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCD3P28288 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.04■□□□□ 0.8
ABCD3P28288 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ABCD3P28288 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ABCD3P28288 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
ABCD3P28288 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 AC127496.7-201ENST00000625110 1798 ntBASIC20.03■□□□□ 0.8
ABCD3P28288 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.03■□□□□ 0.8
ABCD3P28288 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 AC079089.2-201ENST00000531211 1277 ntBASIC20.03■□□□□ 0.8
ABCD3P28288 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.03■□□□□ 0.8
ABCD3P28288 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ABCD3P28288 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ABCD3P28288 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
ABCD3P28288 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCD3P28288 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCD3P28288 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.02■□□□□ 0.8
ABCD3P28288 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCD3P28288 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ABCD3P28288 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.02■□□□□ 0.8
ABCD3P28288 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
ABCD3P28288 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.02■□□□□ 0.79
ABCD3P28288 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ABCD3P28288 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.02■□□□□ 0.79
ABCD3P28288 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCD3P28288 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCD3P28288 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 LGR4-203ENST00000480977 492 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCD3P28288 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 AC233723.2-201ENST00000623798 2106 ntBASIC20.01■□□□□ 0.79
ABCD3P28288 AC105233.4-201ENST00000642045 216 ntBASIC20.01■□□□□ 0.79
ABCD3P28288 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.01■□□□□ 0.79
ABCD3P28288 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
ABCD3P28288 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCD3P28288 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCD3P28288 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ABCD3P28288 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
ABCD3P28288 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
ABCD3P28288 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ABCD3P28288 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20■□□□□ 0.79
ABCD3P28288 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ABCD3P28288 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
ABCD3P28288 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
ABCD3P28288 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20■□□□□ 0.79
ABCD3P28288 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20■□□□□ 0.79
ABCD3P28288 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
ABCD3P28288 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20■□□□□ 0.79
ABCD3P28288 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms