Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR4A1P22736 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
NR4A1P22736 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NR4A1P22736 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NR4A1P22736 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
NR4A1P22736 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.06■□□□□ 0.8
NR4A1P22736 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
NR4A1P22736 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.06■□□□□ 0.8
NR4A1P22736 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NR4A1P22736 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NR4A1P22736 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR4A1P22736 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR4A1P22736 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR4A1P22736 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NR4A1P22736 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR4A1P22736 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
NR4A1P22736 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.05■□□□□ 0.8
NR4A1P22736 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.05■□□□□ 0.8
NR4A1P22736 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR4A1P22736 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NR4A1P22736 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR4A1P22736 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NR4A1P22736 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
NR4A1P22736 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.04■□□□□ 0.8
NR4A1P22736 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.04■□□□□ 0.8
NR4A1P22736 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.04■□□□□ 0.8
NR4A1P22736 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
NR4A1P22736 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NR4A1P22736 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NR4A1P22736 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NR4A1P22736 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NR4A1P22736 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
NR4A1P22736 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
NR4A1P22736 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR4A1P22736 TK2-202ENST00000417693 1046 ntTSL 2 BASIC20.03■□□□□ 0.8
NR4A1P22736 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR4A1P22736 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.03■□□□□ 0.8
NR4A1P22736 AC092028.1-203ENST00000608262 953 ntBASIC20.03■□□□□ 0.8
NR4A1P22736 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.03■□□□□ 0.8
NR4A1P22736 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR4A1P22736 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.03■□□□□ 0.8
NR4A1P22736 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NR4A1P22736 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NR4A1P22736 AL157384.1-201ENST00000445995 2473 ntBASIC20.02■□□□□ 0.8
NR4A1P22736 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR4A1P22736 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR4A1P22736 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
NR4A1P22736 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.02■□□□□ 0.8
NR4A1P22736 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.02■□□□□ 0.8
NR4A1P22736 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.02■□□□□ 0.8
NR4A1P22736 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.02■□□□□ 0.8
NR4A1P22736 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.02■□□□□ 0.8
NR4A1P22736 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR4A1P22736 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR4A1P22736 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR4A1P22736 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.02■□□□□ 0.8
NR4A1P22736 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR4A1P22736 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NR4A1P22736 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.02■□□□□ 0.8
NR4A1P22736 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.02■□□□□ 0.8
NR4A1P22736 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.02■□□□□ 0.79
NR4A1P22736 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NR4A1P22736 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
NR4A1P22736 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NR4A1P22736 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR4A1P22736 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR4A1P22736 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NR4A1P22736 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NR4A1P22736 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.01■□□□□ 0.79
NR4A1P22736 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC20.01■□□□□ 0.79
NR4A1P22736 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.01■□□□□ 0.79
NR4A1P22736 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
NR4A1P22736 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR4A1P22736 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR4A1P22736 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20■□□□□ 0.79
NR4A1P22736 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NR4A1P22736 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NR4A1P22736 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20■□□□□ 0.79
NR4A1P22736 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms