Protein–RNA interactions for Protein: P0C2J1

TY1B-PR3, Transposon Ty1-PR3 Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR3P0C2J1 SIZ1YDR409W 2715 nt4.27□□□□□ -1.73
TY1B-PR3P0C2J1 YCL023CYCL023C 348 nt4.27□□□□□ -1.73
TY1B-PR3P0C2J1 MCP2YLR253W 1710 nt4.26□□□□□ -1.73
TY1B-PR3P0C2J1 WSS1YHR134W 810 nt4.26□□□□□ -1.73
TY1B-PR3P0C2J1 YAP5YIR018W 738 nt4.26□□□□□ -1.73
TY1B-PR3P0C2J1 EMC6YLL014W 327 nt4.26□□□□□ -1.73
TY1B-PR3P0C2J1 KAR4YCL055W 1008 nt4.26□□□□□ -1.73
TY1B-PR3P0C2J1 APM4YOL062C 1476 nt4.26□□□□□ -1.73
TY1B-PR3P0C2J1 TUL1YKL034W 2277 nt4.26□□□□□ -1.73
TY1B-PR3P0C2J1 MPC54YOR177C 1395 nt4.26□□□□□ -1.73
TY1B-PR3P0C2J1 ARP1YHR129C 1155 nt4.25□□□□□ -1.73
TY1B-PR3P0C2J1 YLR374CYLR374C 390 nt4.25□□□□□ -1.73
TY1B-PR3P0C2J1 RAD33YML011C 534 nt4.25□□□□□ -1.73
TY1B-PR3P0C2J1 YOR338WYOR338W 1092 nt4.25□□□□□ -1.73
TY1B-PR3P0C2J1 COM2YER130C 1332 nt4.25□□□□□ -1.73
TY1B-PR3P0C2J1 CSR2YPR030W 3366 nt4.25□□□□□ -1.73
TY1B-PR3P0C2J1 CDC11YJR076C 1248 nt4.25□□□□□ -1.73
TY1B-PR3P0C2J1 SMA2YML066C 1110 nt4.25□□□□□ -1.73
TY1B-PR3P0C2J1 SDS23YGL056C 1584 nt4.24□□□□□ -1.73
TY1B-PR3P0C2J1 YEL025CYEL025C 3567 nt4.24□□□□□ -1.73
TY1B-PR3P0C2J1 PDR1YGL013C 3207 nt4.24□□□□□ -1.73
TY1B-PR3P0C2J1 PUG1YER185W 912 nt4.23□□□□□ -1.73
TY1B-PR3P0C2J1 RAD17YOR368W 1206 nt4.23□□□□□ -1.73
TY1B-PR3P0C2J1 CMD1YBR109C 444 nt4.23□□□□□ -1.73
TY1B-PR3P0C2J1 SWR1YDR334W 4545 nt4.23□□□□□ -1.73
TY1B-PR3P0C2J1 OSW7YFR039C 1533 nt4.23□□□□□ -1.73
TY1B-PR3P0C2J1 STE11YLR362W 2154 nt4.23□□□□□ -1.73
TY1B-PR3P0C2J1 tW(CCA)G1tW(CCA)G1 72 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 tW(CCA)G2tW(CCA)G2 72 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 tW(CCA)JtW(CCA)J 72 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 tW(CCA)KtW(CCA)K 72 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 tW(CCA)MtW(CCA)M 72 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 tW(CCA)PtW(CCA)P 72 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 SAM37YMR060C 984 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 SEC17YBL050W 879 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 RBA50YDR527W 1320 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 STP4YDL048C 1473 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 SAP155YFR040W 3009 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 YGL140CYGL140C 3660 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 MPS2YGL075C 1164 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 LNP1YHR192W 837 nt4.22□□□□□ -1.73
TY1B-PR3P0C2J1 MNL1YHR204W 2391 nt4.21□□□□□ -1.73
TY1B-PR3P0C2J1 YDR222WYDR222W 1248 nt4.21□□□□□ -1.74
TY1B-PR3P0C2J1 PHM6YDR281C 315 nt4.21□□□□□ -1.74
TY1B-PR3P0C2J1 MPC3YGR243W 441 nt4.21□□□□□ -1.74
TY1B-PR3P0C2J1 YNL108CYNL108C 813 nt4.21□□□□□ -1.74
TY1B-PR3P0C2J1 UGA3YDL170W 1587 nt4.2□□□□□ -1.74
TY1B-PR3P0C2J1 YFR032C-BYFR032C-B 264 nt4.2□□□□□ -1.74
TY1B-PR3P0C2J1 YHR032W-AYHR032W-A 180 nt4.2□□□□□ -1.74
TY1B-PR3P0C2J1 ASG7YJL170C 630 nt4.2□□□□□ -1.74
TY1B-PR3P0C2J1 YLR346CYLR346C 306 nt4.2□□□□□ -1.74
TY1B-PR3P0C2J1 YCL022CYCL022C 516 nt4.2□□□□□ -1.74
TY1B-PR3P0C2J1 VPS36YLR417W 1701 nt4.2□□□□□ -1.74
TY1B-PR3P0C2J1 IZH3YLR023C 1632 nt4.2□□□□□ -1.74
TY1B-PR3P0C2J1 TIS11YLR136C 858 nt4.19□□□□□ -1.74
TY1B-PR3P0C2J1 GCD1YOR260W 1737 nt4.19□□□□□ -1.74
TY1B-PR3P0C2J1 RAM1YDL090C 1296 nt4.19□□□□□ -1.74
TY1B-PR3P0C2J1 LSM12YHR121W 564 nt4.19□□□□□ -1.74
TY1B-PR3P0C2J1 YSH1YLR277C 2340 nt4.19□□□□□ -1.74
TY1B-PR3P0C2J1 SCP160YJL080C 3669 nt4.18□□□□□ -1.74
TY1B-PR3P0C2J1 ARP8YOR141C 2646 nt4.18□□□□□ -1.74
TY1B-PR3P0C2J1 RPL13AYDL082W 600 nt4.18□□□□□ -1.74
TY1B-PR3P0C2J1 CNL1YDR357C 369 nt4.18□□□□□ -1.74
TY1B-PR3P0C2J1 YOR186WYOR186W 435 nt4.18□□□□□ -1.74
TY1B-PR3P0C2J1 RTT10YPL183C 3042 nt4.18□□□□□ -1.74
TY1B-PR3P0C2J1 GIN4YDR507C 3429 nt4.17□□□□□ -1.74
TY1B-PR3P0C2J1 MHO1YJR008W 1017 nt4.17□□□□□ -1.74
TY1B-PR3P0C2J1 DDI3YNL335W 678 nt4.17□□□□□ -1.74
TY1B-PR3P0C2J1 YOR385WYOR385W 873 nt4.17□□□□□ -1.74
TY1B-PR3P0C2J1 SLP1YOR154W 1764 nt4.17□□□□□ -1.74
TY1B-PR3P0C2J1 ROK1YGL171W 1695 nt4.17□□□□□ -1.74
TY1B-PR3P0C2J1 STP2YHR006W 1626 nt4.16□□□□□ -1.74
TY1B-PR3P0C2J1 YRM1YOR172W 2361 nt4.16□□□□□ -1.74
TY1B-PR3P0C2J1 DAL2YIR029W 1032 nt4.16□□□□□ -1.74
TY1B-PR3P0C2J1 ANB1YJR047C 474 nt4.16□□□□□ -1.74
TY1B-PR3P0C2J1 RPL17AYKL180W 555 nt4.16□□□□□ -1.74
TY1B-PR3P0C2J1 FZO1YBR179C 2568 nt4.15□□□□□ -1.74
TY1B-PR3P0C2J1 RPL6AYML073C 531 nt4.15□□□□□ -1.74
TY1B-PR3P0C2J1 GYP7YDL234C 2241 nt4.15□□□□□ -1.75
TY1B-PR3P0C2J1 SNQ2YDR011W 4506 nt4.15□□□□□ -1.75
TY1B-PR3P0C2J1 APL6YGR261C 2430 nt4.15□□□□□ -1.75
TY1B-PR3P0C2J1 KIP1YBL063W 3336 nt4.15□□□□□ -1.75
TY1B-PR3P0C2J1 ERG28YER044C 447 nt4.14□□□□□ -1.75
TY1B-PR3P0C2J1 YLR347W-AYLR347W-A 141 nt4.14□□□□□ -1.75
TY1B-PR3P0C2J1 SEC26YDR238C 2922 nt4.14□□□□□ -1.75
TY1B-PR3P0C2J1 YOR300WYOR300W 309 nt4.14□□□□□ -1.75
TY1B-PR3P0C2J1 TFC4YGR047C 3078 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 MNT4YNR059W 1743 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 YJL132WYJL132W 2253 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 AST2YER101C 1293 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 AAD16YFL057C 459 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 PET54YGR222W 882 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 THP2YHR167W 786 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 RPS22AYJL190C 393 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 SFH1YLR321C 1281 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 SRC1YML034W 2505 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 OSH2YDL019C 3852 nt4.13□□□□□ -1.75
TY1B-PR3P0C2J1 RPL13BYMR142C 600 nt4.12□□□□□ -1.75
TY1B-PR3P0C2J1 YGK3YOL128C 1128 nt4.12□□□□□ -1.75
TY1B-PR3P0C2J1 PRM15YMR278W 1869 nt4.12□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms