Protein–RNA interactions for Protein: P0C2J0

TY1B-PR2, Transposon Ty1-PR2 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,756 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-PR2P0C2J0 YHR078WYHR078W 1659 nt4.29□□□□□ -1.72
TY1B-PR2P0C2J0 SMF1YOL122C 1728 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 NEW1YPL226W 3591 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 SPS22YCL048W 1392 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 RPS13YDR064W 456 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 YDR537CYDR537C 606 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 TOS8YGL096W 831 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 YMR085WYMR085W 1299 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 MNN1YER001W 2289 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 STP4YDL048C 1473 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 GCR2YNL199C 1605 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 MSE1YOL033W 1611 nt4.28□□□□□ -1.72
TY1B-PR2P0C2J0 EMC1YCL045C 2283 nt4.28□□□□□ -1.73
TY1B-PR2P0C2J0 SIZ1YDR409W 2715 nt4.27□□□□□ -1.73
TY1B-PR2P0C2J0 HPC2YBR215W 1878 nt4.27□□□□□ -1.73
TY1B-PR2P0C2J0 YCL023CYCL023C 348 nt4.27□□□□□ -1.73
TY1B-PR2P0C2J0 MCP2YLR253W 1710 nt4.26□□□□□ -1.73
TY1B-PR2P0C2J0 WSS1YHR134W 810 nt4.26□□□□□ -1.73
TY1B-PR2P0C2J0 YAP5YIR018W 738 nt4.26□□□□□ -1.73
TY1B-PR2P0C2J0 EMC6YLL014W 327 nt4.26□□□□□ -1.73
TY1B-PR2P0C2J0 KAR4YCL055W 1008 nt4.26□□□□□ -1.73
TY1B-PR2P0C2J0 APM4YOL062C 1476 nt4.26□□□□□ -1.73
TY1B-PR2P0C2J0 MPC54YOR177C 1395 nt4.26□□□□□ -1.73
TY1B-PR2P0C2J0 YLR374CYLR374C 390 nt4.25□□□□□ -1.73
TY1B-PR2P0C2J0 RAD33YML011C 534 nt4.25□□□□□ -1.73
TY1B-PR2P0C2J0 YOR338WYOR338W 1092 nt4.25□□□□□ -1.73
TY1B-PR2P0C2J0 COM2YER130C 1332 nt4.25□□□□□ -1.73
TY1B-PR2P0C2J0 CSR2YPR030W 3366 nt4.25□□□□□ -1.73
TY1B-PR2P0C2J0 SMA2YML066C 1110 nt4.25□□□□□ -1.73
TY1B-PR2P0C2J0 SDS23YGL056C 1584 nt4.24□□□□□ -1.73
TY1B-PR2P0C2J0 YEL025CYEL025C 3567 nt4.24□□□□□ -1.73
TY1B-PR2P0C2J0 PDR1YGL013C 3207 nt4.24□□□□□ -1.73
TY1B-PR2P0C2J0 PUG1YER185W 912 nt4.23□□□□□ -1.73
TY1B-PR2P0C2J0 RAD17YOR368W 1206 nt4.23□□□□□ -1.73
TY1B-PR2P0C2J0 CMD1YBR109C 444 nt4.23□□□□□ -1.73
TY1B-PR2P0C2J0 SWR1YDR334W 4545 nt4.23□□□□□ -1.73
TY1B-PR2P0C2J0 OSW7YFR039C 1533 nt4.23□□□□□ -1.73
TY1B-PR2P0C2J0 STE11YLR362W 2154 nt4.23□□□□□ -1.73
TY1B-PR2P0C2J0 tW(CCA)G1tW(CCA)G1 72 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 tW(CCA)G2tW(CCA)G2 72 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 tW(CCA)JtW(CCA)J 72 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 tW(CCA)KtW(CCA)K 72 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 tW(CCA)MtW(CCA)M 72 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 tW(CCA)PtW(CCA)P 72 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 SAM37YMR060C 984 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 SAP155YFR040W 3009 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 YGL140CYGL140C 3660 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 YDL023CYDL023C 321 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 MPS2YGL075C 1164 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 LNP1YHR192W 837 nt4.22□□□□□ -1.73
TY1B-PR2P0C2J0 MNL1YHR204W 2391 nt4.21□□□□□ -1.73
TY1B-PR2P0C2J0 YDR222WYDR222W 1248 nt4.21□□□□□ -1.74
TY1B-PR2P0C2J0 PHM6YDR281C 315 nt4.21□□□□□ -1.74
TY1B-PR2P0C2J0 MPC3YGR243W 441 nt4.21□□□□□ -1.74
TY1B-PR2P0C2J0 UGA3YDL170W 1587 nt4.2□□□□□ -1.74
TY1B-PR2P0C2J0 YFR032C-BYFR032C-B 264 nt4.2□□□□□ -1.74
TY1B-PR2P0C2J0 YHR032W-AYHR032W-A 180 nt4.2□□□□□ -1.74
TY1B-PR2P0C2J0 ASG7YJL170C 630 nt4.2□□□□□ -1.74
TY1B-PR2P0C2J0 YBR226CYBR226C 411 nt4.2□□□□□ -1.74
TY1B-PR2P0C2J0 YCL022CYCL022C 516 nt4.2□□□□□ -1.74
TY1B-PR2P0C2J0 VPS36YLR417W 1701 nt4.2□□□□□ -1.74
TY1B-PR2P0C2J0 IZH3YLR023C 1632 nt4.2□□□□□ -1.74
TY1B-PR2P0C2J0 TIS11YLR136C 858 nt4.19□□□□□ -1.74
TY1B-PR2P0C2J0 GCD1YOR260W 1737 nt4.19□□□□□ -1.74
TY1B-PR2P0C2J0 MBP1YDL056W 2502 nt4.19□□□□□ -1.74
TY1B-PR2P0C2J0 OSH2YDL019C 3852 nt4.19□□□□□ -1.74
TY1B-PR2P0C2J0 CHS5YLR330W 2016 nt4.19□□□□□ -1.74
TY1B-PR2P0C2J0 RAM1YDL090C 1296 nt4.19□□□□□ -1.74
TY1B-PR2P0C2J0 LSM12YHR121W 564 nt4.19□□□□□ -1.74
TY1B-PR2P0C2J0 YSH1YLR277C 2340 nt4.19□□□□□ -1.74
TY1B-PR2P0C2J0 SCP160YJL080C 3669 nt4.18□□□□□ -1.74
TY1B-PR2P0C2J0 ARP8YOR141C 2646 nt4.18□□□□□ -1.74
TY1B-PR2P0C2J0 RPL13AYDL082W 600 nt4.18□□□□□ -1.74
TY1B-PR2P0C2J0 CNL1YDR357C 369 nt4.18□□□□□ -1.74
TY1B-PR2P0C2J0 YOR186WYOR186W 435 nt4.18□□□□□ -1.74
TY1B-PR2P0C2J0 RTT10YPL183C 3042 nt4.18□□□□□ -1.74
TY1B-PR2P0C2J0 GIN4YDR507C 3429 nt4.17□□□□□ -1.74
TY1B-PR2P0C2J0 MHO1YJR008W 1017 nt4.17□□□□□ -1.74
TY1B-PR2P0C2J0 DDI3YNL335W 678 nt4.17□□□□□ -1.74
TY1B-PR2P0C2J0 YOR385WYOR385W 873 nt4.17□□□□□ -1.74
TY1B-PR2P0C2J0 YKR023WYKR023W 1593 nt4.17□□□□□ -1.74
TY1B-PR2P0C2J0 SLP1YOR154W 1764 nt4.17□□□□□ -1.74
TY1B-PR2P0C2J0 ROK1YGL171W 1695 nt4.17□□□□□ -1.74
TY1B-PR2P0C2J0 STP2YHR006W 1626 nt4.16□□□□□ -1.74
TY1B-PR2P0C2J0 YRM1YOR172W 2361 nt4.16□□□□□ -1.74
TY1B-PR2P0C2J0 DAL2YIR029W 1032 nt4.16□□□□□ -1.74
TY1B-PR2P0C2J0 ANB1YJR047C 474 nt4.16□□□□□ -1.74
TY1B-PR2P0C2J0 RPL17AYKL180W 555 nt4.16□□□□□ -1.74
TY1B-PR2P0C2J0 DBF2YGR092W 1719 nt4.15□□□□□ -1.74
TY1B-PR2P0C2J0 RPL6AYML073C 531 nt4.15□□□□□ -1.74
TY1B-PR2P0C2J0 GYP7YDL234C 2241 nt4.15□□□□□ -1.75
TY1B-PR2P0C2J0 FRE1YLR214W 2061 nt4.15□□□□□ -1.75
TY1B-PR2P0C2J0 SNQ2YDR011W 4506 nt4.15□□□□□ -1.75
TY1B-PR2P0C2J0 KIP1YBL063W 3336 nt4.15□□□□□ -1.75
TY1B-PR2P0C2J0 ERG28YER044C 447 nt4.14□□□□□ -1.75
TY1B-PR2P0C2J0 YHR193C-AYHR193C-A 375 nt4.14□□□□□ -1.75
TY1B-PR2P0C2J0 YLR347W-AYLR347W-A 141 nt4.14□□□□□ -1.75
TY1B-PR2P0C2J0 SEC26YDR238C 2922 nt4.14□□□□□ -1.75
TY1B-PR2P0C2J0 YDL124WYDL124W 939 nt4.14□□□□□ -1.75
TY1B-PR2P0C2J0 YML119WYML119W 1074 nt4.14□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 27.6 ms