Protein–RNA interactions for Protein: P0C2I3

TY1B-DR6, Transposon Ty1-DR6 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-DR6P0C2I3 SIZ1YDR409W 2715 nt4.27□□□□□ -1.73
TY1B-DR6P0C2I3 YCL023CYCL023C 348 nt4.27□□□□□ -1.73
TY1B-DR6P0C2I3 MCP2YLR253W 1710 nt4.26□□□□□ -1.73
TY1B-DR6P0C2I3 WSS1YHR134W 810 nt4.26□□□□□ -1.73
TY1B-DR6P0C2I3 YAP5YIR018W 738 nt4.26□□□□□ -1.73
TY1B-DR6P0C2I3 EMC6YLL014W 327 nt4.26□□□□□ -1.73
TY1B-DR6P0C2I3 KAR4YCL055W 1008 nt4.26□□□□□ -1.73
TY1B-DR6P0C2I3 APM4YOL062C 1476 nt4.26□□□□□ -1.73
TY1B-DR6P0C2I3 TUL1YKL034W 2277 nt4.26□□□□□ -1.73
TY1B-DR6P0C2I3 MPC54YOR177C 1395 nt4.26□□□□□ -1.73
TY1B-DR6P0C2I3 ARP1YHR129C 1155 nt4.25□□□□□ -1.73
TY1B-DR6P0C2I3 YLR374CYLR374C 390 nt4.25□□□□□ -1.73
TY1B-DR6P0C2I3 RAD33YML011C 534 nt4.25□□□□□ -1.73
TY1B-DR6P0C2I3 YOR338WYOR338W 1092 nt4.25□□□□□ -1.73
TY1B-DR6P0C2I3 COM2YER130C 1332 nt4.25□□□□□ -1.73
TY1B-DR6P0C2I3 CSR2YPR030W 3366 nt4.25□□□□□ -1.73
TY1B-DR6P0C2I3 CDC11YJR076C 1248 nt4.25□□□□□ -1.73
TY1B-DR6P0C2I3 SMA2YML066C 1110 nt4.25□□□□□ -1.73
TY1B-DR6P0C2I3 SDS23YGL056C 1584 nt4.24□□□□□ -1.73
TY1B-DR6P0C2I3 YEL025CYEL025C 3567 nt4.24□□□□□ -1.73
TY1B-DR6P0C2I3 PDR1YGL013C 3207 nt4.24□□□□□ -1.73
TY1B-DR6P0C2I3 PUG1YER185W 912 nt4.23□□□□□ -1.73
TY1B-DR6P0C2I3 RAD17YOR368W 1206 nt4.23□□□□□ -1.73
TY1B-DR6P0C2I3 CMD1YBR109C 444 nt4.23□□□□□ -1.73
TY1B-DR6P0C2I3 SWR1YDR334W 4545 nt4.23□□□□□ -1.73
TY1B-DR6P0C2I3 OSW7YFR039C 1533 nt4.23□□□□□ -1.73
TY1B-DR6P0C2I3 STE11YLR362W 2154 nt4.23□□□□□ -1.73
TY1B-DR6P0C2I3 tW(CCA)G1tW(CCA)G1 72 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 tW(CCA)G2tW(CCA)G2 72 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 tW(CCA)JtW(CCA)J 72 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 tW(CCA)KtW(CCA)K 72 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 tW(CCA)MtW(CCA)M 72 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 tW(CCA)PtW(CCA)P 72 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 SAM37YMR060C 984 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 SEC17YBL050W 879 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 RBA50YDR527W 1320 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 STP4YDL048C 1473 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 SAP155YFR040W 3009 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 YGL140CYGL140C 3660 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 MPS2YGL075C 1164 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 LNP1YHR192W 837 nt4.22□□□□□ -1.73
TY1B-DR6P0C2I3 MNL1YHR204W 2391 nt4.21□□□□□ -1.73
TY1B-DR6P0C2I3 YDR222WYDR222W 1248 nt4.21□□□□□ -1.74
TY1B-DR6P0C2I3 PHM6YDR281C 315 nt4.21□□□□□ -1.74
TY1B-DR6P0C2I3 MPC3YGR243W 441 nt4.21□□□□□ -1.74
TY1B-DR6P0C2I3 YNL108CYNL108C 813 nt4.21□□□□□ -1.74
TY1B-DR6P0C2I3 UGA3YDL170W 1587 nt4.2□□□□□ -1.74
TY1B-DR6P0C2I3 YFR032C-BYFR032C-B 264 nt4.2□□□□□ -1.74
TY1B-DR6P0C2I3 YHR032W-AYHR032W-A 180 nt4.2□□□□□ -1.74
TY1B-DR6P0C2I3 ASG7YJL170C 630 nt4.2□□□□□ -1.74
TY1B-DR6P0C2I3 YLR346CYLR346C 306 nt4.2□□□□□ -1.74
TY1B-DR6P0C2I3 YCL022CYCL022C 516 nt4.2□□□□□ -1.74
TY1B-DR6P0C2I3 VPS36YLR417W 1701 nt4.2□□□□□ -1.74
TY1B-DR6P0C2I3 IZH3YLR023C 1632 nt4.2□□□□□ -1.74
TY1B-DR6P0C2I3 TIS11YLR136C 858 nt4.19□□□□□ -1.74
TY1B-DR6P0C2I3 GCD1YOR260W 1737 nt4.19□□□□□ -1.74
TY1B-DR6P0C2I3 RAM1YDL090C 1296 nt4.19□□□□□ -1.74
TY1B-DR6P0C2I3 LSM12YHR121W 564 nt4.19□□□□□ -1.74
TY1B-DR6P0C2I3 YSH1YLR277C 2340 nt4.19□□□□□ -1.74
TY1B-DR6P0C2I3 SCP160YJL080C 3669 nt4.18□□□□□ -1.74
TY1B-DR6P0C2I3 ARP8YOR141C 2646 nt4.18□□□□□ -1.74
TY1B-DR6P0C2I3 RPL13AYDL082W 600 nt4.18□□□□□ -1.74
TY1B-DR6P0C2I3 CNL1YDR357C 369 nt4.18□□□□□ -1.74
TY1B-DR6P0C2I3 YOR186WYOR186W 435 nt4.18□□□□□ -1.74
TY1B-DR6P0C2I3 RTT10YPL183C 3042 nt4.18□□□□□ -1.74
TY1B-DR6P0C2I3 GIN4YDR507C 3429 nt4.17□□□□□ -1.74
TY1B-DR6P0C2I3 MHO1YJR008W 1017 nt4.17□□□□□ -1.74
TY1B-DR6P0C2I3 DDI3YNL335W 678 nt4.17□□□□□ -1.74
TY1B-DR6P0C2I3 YOR385WYOR385W 873 nt4.17□□□□□ -1.74
TY1B-DR6P0C2I3 SLP1YOR154W 1764 nt4.17□□□□□ -1.74
TY1B-DR6P0C2I3 ROK1YGL171W 1695 nt4.17□□□□□ -1.74
TY1B-DR6P0C2I3 STP2YHR006W 1626 nt4.16□□□□□ -1.74
TY1B-DR6P0C2I3 YRM1YOR172W 2361 nt4.16□□□□□ -1.74
TY1B-DR6P0C2I3 DAL2YIR029W 1032 nt4.16□□□□□ -1.74
TY1B-DR6P0C2I3 ANB1YJR047C 474 nt4.16□□□□□ -1.74
TY1B-DR6P0C2I3 RPL17AYKL180W 555 nt4.16□□□□□ -1.74
TY1B-DR6P0C2I3 FZO1YBR179C 2568 nt4.15□□□□□ -1.74
TY1B-DR6P0C2I3 RPL6AYML073C 531 nt4.15□□□□□ -1.74
TY1B-DR6P0C2I3 GYP7YDL234C 2241 nt4.15□□□□□ -1.75
TY1B-DR6P0C2I3 SNQ2YDR011W 4506 nt4.15□□□□□ -1.75
TY1B-DR6P0C2I3 APL6YGR261C 2430 nt4.15□□□□□ -1.75
TY1B-DR6P0C2I3 KIP1YBL063W 3336 nt4.15□□□□□ -1.75
TY1B-DR6P0C2I3 ERG28YER044C 447 nt4.14□□□□□ -1.75
TY1B-DR6P0C2I3 YLR347W-AYLR347W-A 141 nt4.14□□□□□ -1.75
TY1B-DR6P0C2I3 SEC26YDR238C 2922 nt4.14□□□□□ -1.75
TY1B-DR6P0C2I3 YOR300WYOR300W 309 nt4.14□□□□□ -1.75
TY1B-DR6P0C2I3 TFC4YGR047C 3078 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 MNT4YNR059W 1743 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 YJL132WYJL132W 2253 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 AST2YER101C 1293 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 AAD16YFL057C 459 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 PET54YGR222W 882 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 THP2YHR167W 786 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 RPS22AYJL190C 393 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 SFH1YLR321C 1281 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 SRC1YML034W 2505 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 OSH2YDL019C 3852 nt4.13□□□□□ -1.75
TY1B-DR6P0C2I3 RPL13BYMR142C 600 nt4.12□□□□□ -1.75
TY1B-DR6P0C2I3 YGK3YOL128C 1128 nt4.12□□□□□ -1.75
TY1B-DR6P0C2I3 PRM15YMR278W 1869 nt4.12□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms