Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AL121832.2-201ENST00000610979 668 ntBASIC22.26■■□□□ 1.15
COL4A2P08572 TFG-210ENST00000620299 1289 ntTSL 5 BASIC22.26■■□□□ 1.15
COL4A2P08572 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A2P08572 OXCT2P1-201ENST00000447263 1535 ntBASIC22.25■■□□□ 1.15
COL4A2P08572 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A2P08572 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A2P08572 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A2P08572 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.25■■□□□ 1.15
COL4A2P08572 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC22.25■■□□□ 1.15
COL4A2P08572 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A2P08572 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
COL4A2P08572 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A2P08572 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
COL4A2P08572 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A2P08572 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
COL4A2P08572 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A2P08572 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.24■■□□□ 1.15
COL4A2P08572 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.24■■□□□ 1.15
COL4A2P08572 MFF-207ENST00000409565 1548 ntTSL 2 BASIC22.24■■□□□ 1.15
COL4A2P08572 KRT18P6-201ENST00000555540 1265 ntBASIC22.24■■□□□ 1.15
COL4A2P08572 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A2P08572 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
COL4A2P08572 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A2P08572 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A2P08572 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A2P08572 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.23■■□□□ 1.15
COL4A2P08572 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.23■■□□□ 1.15
COL4A2P08572 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
COL4A2P08572 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.23■■□□□ 1.15
COL4A2P08572 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A2P08572 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A2P08572 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
COL4A2P08572 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A2P08572 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A2P08572 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC22.23■■□□□ 1.15
COL4A2P08572 AL138781.1-201ENST00000566567 1274 ntBASIC22.23■■□□□ 1.15
COL4A2P08572 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
COL4A2P08572 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL4A2P08572 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
COL4A2P08572 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.22■■□□□ 1.15
COL4A2P08572 PXK-203ENST00000383715 1756 ntTSL 5 BASIC22.22■■□□□ 1.15
COL4A2P08572 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.22■■□□□ 1.15
COL4A2P08572 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL4A2P08572 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL4A2P08572 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.22■■□□□ 1.15
COL4A2P08572 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
COL4A2P08572 LINC01124-201ENST00000409786 2117 ntBASIC22.21■■□□□ 1.15
COL4A2P08572 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
COL4A2P08572 AC069152.1-201ENST00000438030 544 ntBASIC22.21■■□□□ 1.15
COL4A2P08572 CD99P1-205ENST00000527459 561 ntBASIC22.21■■□□□ 1.15
COL4A2P08572 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.21■■□□□ 1.15
COL4A2P08572 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.21■■□□□ 1.15
COL4A2P08572 AC009237.3-201ENST00000393279 1427 ntBASIC22.21■■□□□ 1.15
COL4A2P08572 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.21■■□□□ 1.15
COL4A2P08572 AL139125.2-201ENST00000623134 1869 ntBASIC22.21■■□□□ 1.15
COL4A2P08572 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
COL4A2P08572 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.2■■□□□ 1.14
COL4A2P08572 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL4A2P08572 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.2■■□□□ 1.14
COL4A2P08572 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
COL4A2P08572 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.2■■□□□ 1.14
COL4A2P08572 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.2■■□□□ 1.14
COL4A2P08572 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL4A2P08572 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL4A2P08572 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
COL4A2P08572 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
COL4A2P08572 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22.2■■□□□ 1.14
COL4A2P08572 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.2■■□□□ 1.14
COL4A2P08572 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.2■■□□□ 1.14
COL4A2P08572 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.2■■□□□ 1.14
COL4A2P08572 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL4A2P08572 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL4A2P08572 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL4A2P08572 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
COL4A2P08572 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL4A2P08572 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL4A2P08572 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
COL4A2P08572 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.19■■□□□ 1.14
COL4A2P08572 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC22.19■■□□□ 1.14
COL4A2P08572 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC22.19■■□□□ 1.14
COL4A2P08572 AC005181.1-201ENST00000604782 1256 ntBASIC22.19■■□□□ 1.14
COL4A2P08572 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
COL4A2P08572 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.18■■□□□ 1.14
COL4A2P08572 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
COL4A2P08572 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL4A2P08572 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.18■■□□□ 1.14
COL4A2P08572 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC22.18■■□□□ 1.14
COL4A2P08572 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
COL4A2P08572 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL4A2P08572 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.18■■□□□ 1.14
COL4A2P08572 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.18■■□□□ 1.14
COL4A2P08572 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
COL4A2P08572 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.17■■□□□ 1.14
COL4A2P08572 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
COL4A2P08572 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
COL4A2P08572 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC22.17■■□□□ 1.14
COL4A2P08572 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
COL4A2P08572 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC22.17■■□□□ 1.14
COL4A2P08572 ABCB10P4-201ENST00000566803 2184 ntBASIC22.17■■□□□ 1.14
COL4A2P08572 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms