Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
UBE4BO95155 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBE4BO95155 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
UBE4BO95155 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC23.87■■□□□ 1.41
UBE4BO95155 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE4BO95155 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
UBE4BO95155 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.87■■□□□ 1.41
UBE4BO95155 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
UBE4BO95155 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC23.87■■□□□ 1.41
UBE4BO95155 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE4BO95155 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
UBE4BO95155 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.87■■□□□ 1.41
UBE4BO95155 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE4BO95155 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE4BO95155 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
UBE4BO95155 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBE4BO95155 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC23.86■■□□□ 1.41
UBE4BO95155 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
UBE4BO95155 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.86■■□□□ 1.41
UBE4BO95155 AL355001.2-201ENST00000620617 1191 ntBASIC23.86■■□□□ 1.41
UBE4BO95155 MPST-208ENST00000628507 698 ntTSL 5 BASIC23.86■■□□□ 1.41
UBE4BO95155 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBE4BO95155 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.86■■□□□ 1.41
UBE4BO95155 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
UBE4BO95155 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
UBE4BO95155 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
UBE4BO95155 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.85■■□□□ 1.41
UBE4BO95155 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE4BO95155 IGHV3-19-201ENST00000521488 291 ntBASIC23.85■■□□□ 1.41
UBE4BO95155 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBE4BO95155 AL031432.3-201ENST00000607698 485 ntBASIC23.85■■□□□ 1.41
UBE4BO95155 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.85■■□□□ 1.41
UBE4BO95155 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.85■■□□□ 1.41
UBE4BO95155 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE4BO95155 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
UBE4BO95155 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBE4BO95155 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBE4BO95155 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
UBE4BO95155 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
UBE4BO95155 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
UBE4BO95155 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE4BO95155 MIR939-201ENST00000401314 82 ntBASIC23.84■■□□□ 1.41
UBE4BO95155 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.84■■□□□ 1.41
UBE4BO95155 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC23.84■■□□□ 1.41
UBE4BO95155 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC23.84■■□□□ 1.41
UBE4BO95155 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
UBE4BO95155 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBE4BO95155 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE4BO95155 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBE4BO95155 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
UBE4BO95155 OR7E47P-201ENST00000546390 1422 ntBASIC23.84■■□□□ 1.41
UBE4BO95155 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.84■■□□□ 1.41
UBE4BO95155 AC099791.1-201ENST00000416440 715 ntBASIC23.84■■□□□ 1.41
UBE4BO95155 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.84■■□□□ 1.41
UBE4BO95155 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
UBE4BO95155 AC126544.1-201ENST00000580842 1059 ntBASIC23.84■■□□□ 1.41
UBE4BO95155 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC23.84■■□□□ 1.41
UBE4BO95155 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE4BO95155 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE4BO95155 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
UBE4BO95155 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
UBE4BO95155 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
UBE4BO95155 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC23.83■■□□□ 1.4
UBE4BO95155 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
UBE4BO95155 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
UBE4BO95155 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.83■■□□□ 1.4
UBE4BO95155 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.83■■□□□ 1.4
UBE4BO95155 AC008764.7-201ENST00000593779 1081 ntBASIC23.83■■□□□ 1.4
UBE4BO95155 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 AF213884.3-201ENST00000563833 479 ntBASIC23.82■■□□□ 1.4
UBE4BO95155 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
UBE4BO95155 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE4BO95155 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE4BO95155 EP400NL-214ENST00000641289 2402 ntBASIC23.81■■□□□ 1.4
UBE4BO95155 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
UBE4BO95155 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC23.81■■□□□ 1.4
UBE4BO95155 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
UBE4BO95155 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBE4BO95155 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE4BO95155 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE4BO95155 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE4BO95155 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.81■■□□□ 1.4
UBE4BO95155 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.81■■□□□ 1.4
UBE4BO95155 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
UBE4BO95155 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC23.81■■□□□ 1.4
UBE4BO95155 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC23.81■■□□□ 1.4
UBE4BO95155 AC091305.1-201ENST00000479476 895 ntBASIC23.81■■□□□ 1.4
UBE4BO95155 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.81■■□□□ 1.4
UBE4BO95155 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
UBE4BO95155 RASA4CP-201ENST00000424092 1398 ntBASIC23.81■■□□□ 1.4
UBE4BO95155 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
UBE4BO95155 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
UBE4BO95155 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms