Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.9■□□□□ 0.94
SNRNP200O75643 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNRNP200O75643 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.9■□□□□ 0.94
SNRNP200O75643 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.9■□□□□ 0.94
SNRNP200O75643 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNRNP200O75643 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SNRNP200O75643 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC20.9■□□□□ 0.94
SNRNP200O75643 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SNRNP200O75643 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNRNP200O75643 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNRNP200O75643 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNRNP200O75643 DUX4L2-201ENST00000561772 1275 ntBASIC20.9■□□□□ 0.94
SNRNP200O75643 AL354811.1-201ENST00000610286 706 ntBASIC20.9■□□□□ 0.94
SNRNP200O75643 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
SNRNP200O75643 DUX4L6-201ENST00000626483 1275 ntBASIC20.9■□□□□ 0.94
SNRNP200O75643 DUX4L1-201ENST00000627662 1275 ntBASIC20.9■□□□□ 0.94
SNRNP200O75643 DUX4L8-201ENST00000629013 1275 ntBASIC20.9■□□□□ 0.94
SNRNP200O75643 DUX4L3-201ENST00000630187 1275 ntBASIC20.9■□□□□ 0.94
SNRNP200O75643 DUX4L7-201ENST00000630678 1275 ntBASIC20.9■□□□□ 0.94
SNRNP200O75643 DUX4L5-201ENST00000630834 1275 ntBASIC20.9■□□□□ 0.94
SNRNP200O75643 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNRNP200O75643 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNRNP200O75643 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.9■□□□□ 0.94
SNRNP200O75643 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNRNP200O75643 AC127496.7-201ENST00000625110 1798 ntBASIC20.89■□□□□ 0.94
SNRNP200O75643 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.89■□□□□ 0.94
SNRNP200O75643 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
SNRNP200O75643 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
SNRNP200O75643 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 AC139530.1-201ENST00000575312 1977 ntBASIC20.89■□□□□ 0.93
SNRNP200O75643 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
SNRNP200O75643 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 MIR6084-201ENST00000622012 110 ntBASIC20.89■□□□□ 0.93
SNRNP200O75643 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNRNP200O75643 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SNRNP200O75643 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNRNP200O75643 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.88■□□□□ 0.93
SNRNP200O75643 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.88■□□□□ 0.93
SNRNP200O75643 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNRNP200O75643 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.88■□□□□ 0.93
SNRNP200O75643 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SNRNP200O75643 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.88■□□□□ 0.93
SNRNP200O75643 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNRNP200O75643 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SNRNP200O75643 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRNP200O75643 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.87■□□□□ 0.93
SNRNP200O75643 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.87■□□□□ 0.93
SNRNP200O75643 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNRNP200O75643 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SNRNP200O75643 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRNP200O75643 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRNP200O75643 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRNP200O75643 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.87■□□□□ 0.93
SNRNP200O75643 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
SNRNP200O75643 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.87■□□□□ 0.93
SNRNP200O75643 SMUG1P1-201ENST00000590640 811 ntBASIC20.87■□□□□ 0.93
SNRNP200O75643 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.87■□□□□ 0.93
SNRNP200O75643 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.87■□□□□ 0.93
SNRNP200O75643 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SNRNP200O75643 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNRNP200O75643 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SNRNP200O75643 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRNP200O75643 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRNP200O75643 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
SNRNP200O75643 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
SNRNP200O75643 AC010141.3-201ENST00000456659 717 ntBASIC20.86■□□□□ 0.93
SNRNP200O75643 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.86■□□□□ 0.93
SNRNP200O75643 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.86■□□□□ 0.93
SNRNP200O75643 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRNP200O75643 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
SNRNP200O75643 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRNP200O75643 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRNP200O75643 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SNRNP200O75643 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRNP200O75643 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNRNP200O75643 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.86■□□□□ 0.93
SNRNP200O75643 AC137767.1-201ENST00000602918 1920 ntBASIC20.86■□□□□ 0.93
SNRNP200O75643 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNRNP200O75643 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRNP200O75643 AC080038.3-201ENST00000623346 1952 ntBASIC20.85■□□□□ 0.93
SNRNP200O75643 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRNP200O75643 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
SNRNP200O75643 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRNP200O75643 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.85■□□□□ 0.93
SNRNP200O75643 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.85■□□□□ 0.93
SNRNP200O75643 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SNRNP200O75643 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SNRNP200O75643 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRNP200O75643 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRNP200O75643 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SNRNP200O75643 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SNRNP200O75643 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.85■□□□□ 0.93
SNRNP200O75643 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.85■□□□□ 0.93
SNRNP200O75643 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms