Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDCD6O75340 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.35■□□□□ 0.53
PDCD6O75340 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.35■□□□□ 0.53
PDCD6O75340 AL117332.1-201ENST00000622628 974 ntBASIC18.35■□□□□ 0.53
PDCD6O75340 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDCD6O75340 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD6O75340 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.34■□□□□ 0.53
PDCD6O75340 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDCD6O75340 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD6O75340 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD6O75340 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD6O75340 AL137060.1-201ENST00000618151 2648 ntBASIC18.34■□□□□ 0.53
PDCD6O75340 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PDCD6O75340 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD6O75340 MIR6724-1-201ENST00000616420 92 ntBASIC18.34■□□□□ 0.53
PDCD6O75340 MIR6724-2-201ENST00000616483 92 ntBASIC18.34■□□□□ 0.53
PDCD6O75340 MIR6724-4-201ENST00000617390 92 ntBASIC18.34■□□□□ 0.53
PDCD6O75340 MIR6724-3-201ENST00000622482 92 ntBASIC18.34■□□□□ 0.53
PDCD6O75340 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD6O75340 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD6O75340 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PDCD6O75340 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.34■□□□□ 0.53
PDCD6O75340 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDCD6O75340 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDCD6O75340 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.33■□□□□ 0.53
PDCD6O75340 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.33■□□□□ 0.53
PDCD6O75340 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.33■□□□□ 0.53
PDCD6O75340 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
PDCD6O75340 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.33■□□□□ 0.52
PDCD6O75340 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.33■□□□□ 0.52
PDCD6O75340 AC241377.3-202ENST00000626088 1088 ntBASIC18.33■□□□□ 0.52
PDCD6O75340 AC241585.3-202ENST00000628937 1088 ntBASIC18.33■□□□□ 0.52
PDCD6O75340 AC245100.8-202ENST00000629247 1058 ntBASIC18.33■□□□□ 0.52
PDCD6O75340 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD6O75340 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.33■□□□□ 0.52
PDCD6O75340 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PDCD6O75340 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDCD6O75340 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD6O75340 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDCD6O75340 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.32■□□□□ 0.52
PDCD6O75340 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PDCD6O75340 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.32■□□□□ 0.52
PDCD6O75340 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDCD6O75340 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD6O75340 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD6O75340 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.32■□□□□ 0.52
PDCD6O75340 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD6O75340 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD6O75340 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
PDCD6O75340 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
PDCD6O75340 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PDCD6O75340 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD6O75340 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.32■□□□□ 0.52
PDCD6O75340 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD6O75340 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDCD6O75340 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD6O75340 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD6O75340 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PDCD6O75340 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD6O75340 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDCD6O75340 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD6O75340 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PDCD6O75340 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
PDCD6O75340 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
PDCD6O75340 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.31■□□□□ 0.52
PDCD6O75340 AL451085.2-201ENST00000605085 799 ntBASIC18.31■□□□□ 0.52
PDCD6O75340 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDCD6O75340 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
PDCD6O75340 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.3■□□□□ 0.52
PDCD6O75340 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.3■□□□□ 0.52
PDCD6O75340 UNC93B8-201ENST00000511903 705 ntBASIC18.3■□□□□ 0.52
PDCD6O75340 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.3■□□□□ 0.52
PDCD6O75340 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
PDCD6O75340 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.3■□□□□ 0.52
PDCD6O75340 AC026310.3-201ENST00000625186 2373 ntBASIC18.3■□□□□ 0.52
PDCD6O75340 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDCD6O75340 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDCD6O75340 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.29■□□□□ 0.52
PDCD6O75340 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms