Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SCN2BO60939 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SCN2BO60939 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SCN2BO60939 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCN2BO60939 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCN2BO60939 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SCN2BO60939 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN2BO60939 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.61■□□□□ 0.89
SCN2BO60939 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SCN2BO60939 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN2BO60939 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
SCN2BO60939 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SCN2BO60939 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.61■□□□□ 0.89
SCN2BO60939 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SCN2BO60939 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SCN2BO60939 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCN2BO60939 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SCN2BO60939 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCN2BO60939 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN2BO60939 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.6■□□□□ 0.89
SCN2BO60939 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.6■□□□□ 0.89
SCN2BO60939 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.6■□□□□ 0.89
SCN2BO60939 AC241377.3-202ENST00000626088 1088 ntBASIC20.6■□□□□ 0.89
SCN2BO60939 AC241585.3-202ENST00000628937 1088 ntBASIC20.6■□□□□ 0.89
SCN2BO60939 AC245100.8-202ENST00000629247 1058 ntBASIC20.6■□□□□ 0.89
SCN2BO60939 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN2BO60939 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCN2BO60939 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCN2BO60939 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.6■□□□□ 0.89
SCN2BO60939 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SCN2BO60939 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.59■□□□□ 0.89
SCN2BO60939 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN2BO60939 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN2BO60939 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.59■□□□□ 0.89
SCN2BO60939 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN2BO60939 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.59■□□□□ 0.89
SCN2BO60939 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.59■□□□□ 0.89
SCN2BO60939 AL031602.1-201ENST00000633169 911 ntBASIC20.59■□□□□ 0.89
SCN2BO60939 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SCN2BO60939 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.59■□□□□ 0.89
SCN2BO60939 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.59■□□□□ 0.89
SCN2BO60939 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.59■□□□□ 0.89
SCN2BO60939 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.59■□□□□ 0.89
SCN2BO60939 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN2BO60939 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SCN2BO60939 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.58■□□□□ 0.89
SCN2BO60939 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN2BO60939 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN2BO60939 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SCN2BO60939 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
SCN2BO60939 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.58■□□□□ 0.89
SCN2BO60939 AC006455.2-201ENST00000429931 906 ntBASIC20.58■□□□□ 0.89
SCN2BO60939 AL035685.1-201ENST00000636663 812 ntBASIC20.58■□□□□ 0.89
SCN2BO60939 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SCN2BO60939 AL137060.1-201ENST00000618151 2648 ntBASIC20.58■□□□□ 0.89
SCN2BO60939 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
SCN2BO60939 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SCN2BO60939 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.58■□□□□ 0.88
SCN2BO60939 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.58■□□□□ 0.88
SCN2BO60939 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.58■□□□□ 0.88
SCN2BO60939 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN2BO60939 FAM99A-202ENST00000538190 1989 ntBASIC20.57■□□□□ 0.88
SCN2BO60939 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN2BO60939 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN2BO60939 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SCN2BO60939 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN2BO60939 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.57■□□□□ 0.88
SCN2BO60939 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN2BO60939 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.57■□□□□ 0.88
SCN2BO60939 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN2BO60939 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN2BO60939 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.57■□□□□ 0.88
SCN2BO60939 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
SCN2BO60939 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SCN2BO60939 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
SCN2BO60939 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 AC026310.3-201ENST00000625186 2373 ntBASIC20.56■□□□□ 0.88
SCN2BO60939 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 KRT16P3-201ENST00000439127 1283 ntBASIC20.56■□□□□ 0.88
SCN2BO60939 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SCN2BO60939 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms