Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC30.3■■■□□ 2.44
BRD4O60885 AC068587.7-201ENST00000641602 218 ntBASIC30.3■■■□□ 2.44
BRD4O60885 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
BRD4O60885 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
BRD4O60885 AC133561.1-201ENST00000568600 2415 ntBASIC30.3■■■□□ 2.44
BRD4O60885 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.3■■■□□ 2.44
BRD4O60885 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
BRD4O60885 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
BRD4O60885 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
BRD4O60885 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC30.29■■■□□ 2.44
BRD4O60885 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.29■■■□□ 2.44
BRD4O60885 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BRD4O60885 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC30.29■■■□□ 2.44
BRD4O60885 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.29■■■□□ 2.44
BRD4O60885 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
BRD4O60885 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC30.29■■■□□ 2.44
BRD4O60885 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
BRD4O60885 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
BRD4O60885 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.28■■■□□ 2.44
BRD4O60885 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC30.28■■■□□ 2.44
BRD4O60885 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.28■■■□□ 2.44
BRD4O60885 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.28■■■□□ 2.44
BRD4O60885 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
BRD4O60885 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
BRD4O60885 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
BRD4O60885 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
BRD4O60885 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
BRD4O60885 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
BRD4O60885 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC30.27■■■□□ 2.44
BRD4O60885 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC30.27■■■□□ 2.44
BRD4O60885 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
BRD4O60885 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC30.26■■■□□ 2.43
BRD4O60885 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
BRD4O60885 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
BRD4O60885 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
BRD4O60885 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
BRD4O60885 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC30.26■■■□□ 2.43
BRD4O60885 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
BRD4O60885 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC30.26■■■□□ 2.43
BRD4O60885 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC30.25■■■□□ 2.43
BRD4O60885 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
BRD4O60885 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
BRD4O60885 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC30.24■■■□□ 2.43
BRD4O60885 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
BRD4O60885 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
BRD4O60885 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC30.24■■■□□ 2.43
BRD4O60885 AL353803.4-201ENST00000565882 1934 ntBASIC30.24■■■□□ 2.43
BRD4O60885 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
BRD4O60885 GAS2L1P2-201ENST00000436355 1356 ntBASIC30.23■■■□□ 2.43
BRD4O60885 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.23■■■□□ 2.43
BRD4O60885 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC30.23■■■□□ 2.43
BRD4O60885 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
BRD4O60885 RAP2CP1-201ENST00000605103 478 ntBASIC30.23■■■□□ 2.43
BRD4O60885 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
BRD4O60885 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
BRD4O60885 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
BRD4O60885 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC30.22■■■□□ 2.43
BRD4O60885 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.22■■■□□ 2.43
BRD4O60885 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC30.22■■■□□ 2.43
BRD4O60885 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
BRD4O60885 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
BRD4O60885 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC30.21■■■□□ 2.43
BRD4O60885 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.21■■■□□ 2.43
BRD4O60885 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.21■■■□□ 2.43
BRD4O60885 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC30.21■■■□□ 2.43
BRD4O60885 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.21■■■□□ 2.43
BRD4O60885 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
BRD4O60885 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.2■■■□□ 2.43
BRD4O60885 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.2■■■□□ 2.43
BRD4O60885 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
BRD4O60885 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
BRD4O60885 GCA-201ENST00000233612 1694 ntTSL 2 BASIC30.2■■■□□ 2.42
BRD4O60885 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
BRD4O60885 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
BRD4O60885 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.19■■■□□ 2.42
BRD4O60885 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
BRD4O60885 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
BRD4O60885 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.19■■■□□ 2.42
BRD4O60885 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.19■■■□□ 2.42
BRD4O60885 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.19■■■□□ 2.42
BRD4O60885 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC30.19■■■□□ 2.42
BRD4O60885 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC30.19■■■□□ 2.42
BRD4O60885 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
BRD4O60885 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC30.19■■■□□ 2.42
BRD4O60885 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC30.19■■■□□ 2.42
BRD4O60885 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
BRD4O60885 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
BRD4O60885 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC30.19■■■□□ 2.42
BRD4O60885 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
BRD4O60885 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
BRD4O60885 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC30.18■■■□□ 2.42
BRD4O60885 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC30.18■■■□□ 2.42
BRD4O60885 HSCB-202ENST00000398941 955 ntTSL 2 BASIC30.18■■■□□ 2.42
BRD4O60885 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
BRD4O60885 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
BRD4O60885 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
BRD4O60885 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
BRD4O60885 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
BRD4O60885 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
BRD4O60885 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms