Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.76■□□□□ 0.75
RNF13O43567 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
RNF13O43567 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF13O43567 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF13O43567 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.76■□□□□ 0.75
RNF13O43567 LINC01960-201ENST00000563759 1884 ntBASIC19.75■□□□□ 0.75
RNF13O43567 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.75■□□□□ 0.75
RNF13O43567 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RNF13O43567 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
RNF13O43567 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF13O43567 AC087742.1-201ENST00000575880 1738 ntBASIC19.74■□□□□ 0.75
RNF13O43567 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF13O43567 SRD5A1P1-201ENST00000442297 786 ntBASIC19.74■□□□□ 0.75
RNF13O43567 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF13O43567 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
RNF13O43567 AC099791.2-201ENST00000605725 427 ntBASIC19.74■□□□□ 0.75
RNF13O43567 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF13O43567 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF13O43567 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF13O43567 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF13O43567 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF13O43567 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF13O43567 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF13O43567 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF13O43567 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF13O43567 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
RNF13O43567 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
RNF13O43567 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF13O43567 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF13O43567 AL499627.2-201ENST00000606283 725 ntBASIC19.73■□□□□ 0.75
RNF13O43567 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF13O43567 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF13O43567 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF13O43567 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF13O43567 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF13O43567 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF13O43567 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF13O43567 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF13O43567 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.72■□□□□ 0.75
RNF13O43567 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF13O43567 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
RNF13O43567 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF13O43567 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RNF13O43567 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF13O43567 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF13O43567 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF13O43567 AC006455.2-201ENST00000429931 906 ntBASIC19.71■□□□□ 0.75
RNF13O43567 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF13O43567 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF13O43567 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF13O43567 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF13O43567 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RNF13O43567 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF13O43567 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF13O43567 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF13O43567 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF13O43567 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF13O43567 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF13O43567 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF13O43567 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF13O43567 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF13O43567 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.7■□□□□ 0.74
RNF13O43567 pRNA.6-201ENST00000610482 90 ntBASIC19.7■□□□□ 0.74
RNF13O43567 pRNA.5-201ENST00000612139 90 ntBASIC19.7■□□□□ 0.74
RNF13O43567 pRNA.11-201ENST00000618423 90 ntBASIC19.7■□□□□ 0.74
RNF13O43567 pRNA.13-201ENST00000619112 90 ntBASIC19.7■□□□□ 0.74
RNF13O43567 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF13O43567 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF13O43567 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF13O43567 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RNF13O43567 RPP21-222ENST00000433076 577 ntTSL 2 BASIC19.69■□□□□ 0.74
RNF13O43567 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms