Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 CCDC92B-201ENST00000575506 885 ntBASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NPIPA2E9PIF3 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 AC022517.1-201ENST00000592429 346 ntBASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NPIPA2E9PIF3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 IKBKGP1-201ENST00000612193 1073 ntBASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 LINC02228-203ENST00000641970 1355 ntBASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NPIPA2E9PIF3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 KRT18P14-201ENST00000534205 1250 ntBASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.77■□□□□ 0.76
NPIPA2E9PIF3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
NPIPA2E9PIF3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.76■□□□□ 0.75
NPIPA2E9PIF3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.75■□□□□ 0.75
NPIPA2E9PIF3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms