Protein–RNA interactions for Protein: A0A140TA62

LOC100653049, Uncharacterized protein, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC100653049A0A140TA62 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC100653049A0A140TA62 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LOC100653049A0A140TA62 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC100653049A0A140TA62 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LOC100653049A0A140TA62 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LOC100653049A0A140TA62 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.05■□□□□ 0.96
LOC100653049A0A140TA62 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LOC100653049A0A140TA62 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
LOC100653049A0A140TA62 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LOC100653049A0A140TA62 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LOC100653049A0A140TA62 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
LOC100653049A0A140TA62 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LOC100653049A0A140TA62 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LOC100653049A0A140TA62 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
LOC100653049A0A140TA62 AF106564.1-201ENST00000607058 2553 ntBASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LOC100653049A0A140TA62 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 AL157384.1-201ENST00000445995 2473 ntBASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
LOC100653049A0A140TA62 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
LOC100653049A0A140TA62 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.02■□□□□ 0.95
LOC100653049A0A140TA62 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
LOC100653049A0A140TA62 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
LOC100653049A0A140TA62 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 GOLGA2P6-201ENST00000340929 2049 ntBASIC21■□□□□ 0.95
LOC100653049A0A140TA62 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
LOC100653049A0A140TA62 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 RARRES2P2-201ENST00000394842 485 ntBASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 BHLHE23-202ENST00000612929 1109 ntBASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
LOC100653049A0A140TA62 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC100653049A0A140TA62 FP325331.1-202ENST00000623531 1380 ntBASIC20.98■□□□□ 0.95
LOC100653049A0A140TA62 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC100653049A0A140TA62 Z98882.1-201ENST00000622160 2253 ntBASIC20.98■□□□□ 0.95
LOC100653049A0A140TA62 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC100653049A0A140TA62 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LOC100653049A0A140TA62 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms