Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
TRBV11-1A0A0K0K1C0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 AC123595.1-201ENST00000440769 1046 ntBASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRBV11-1A0A0K0K1C0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.14■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 C9orf163-202ENST00000624034 2573 ntBASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRBV11-1A0A0K0K1C0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 LINC02228-203ENST00000641970 1355 ntBASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AC079089.2-201ENST00000531211 1277 ntBASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRBV11-1A0A0K0K1C0 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 BX005040.4-201ENST00000637145 1518 ntBASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.11■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AC087742.1-201ENST00000575880 1738 ntBASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AC034268.1-201ENST00000441047 882 ntBASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 CCDC92B-201ENST00000575506 885 ntBASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.08■□□□□ 0.81
TRBV11-1A0A0K0K1C0 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRBV11-1A0A0K0K1C0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms