Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 AC008813.1-201ENST00000536597 885 ntBASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 AC148477.6-201ENST00000623746 465 ntBASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 ADM-207ENST00000530439 1839 ntTSL 2 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
TRAV22A0A0B4J277 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 AC080038.3-201ENST00000623346 1952 ntBASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 AIRN-201ENST00000601203 4374 ntBASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 HNRNPLP2-201ENST00000568980 1570 ntBASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TRAV22A0A0B4J277 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 CD37-213ENST00000598095 1598 ntTSL 2 BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 AC079630.1-202ENST00000618127 1840 ntBASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TRAV22A0A0B4J277 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
TRAV22A0A0B4J277 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
TRAV22A0A0B4J277 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms