Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRAV34A0A0B4J273 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
TRAV34A0A0B4J273 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV34A0A0B4J273 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV34A0A0B4J273 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TRAV34A0A0B4J273 HYI-213ENST00000583037 1322 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV34A0A0B4J273 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TRAV34A0A0B4J273 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms