Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV2A0A0B4J234 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV2A0A0B4J234 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV2A0A0B4J234 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV2A0A0B4J234 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
TRAV2A0A0B4J234 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 USP45-205ENST00000472914 1617 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 NALT1-201ENST00000429224 738 ntTSL 5 BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 PBX2P1-201ENST00000493219 1291 ntBASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 AL139246.5-201ENST00000606645 996 ntBASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 AC233992.3-201ENST00000607491 485 ntBASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRAV2A0A0B4J234 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 SLC47A1P1-202ENST00000449666 945 ntBASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 AC010141.3-201ENST00000456659 717 ntBASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 AC110285.6-201ENST00000617652 491 ntBASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 AC087742.1-201ENST00000575880 1738 ntBASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC16.38■□□□□ 0.21
TRAV2A0A0B4J234 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 EI24-211ENST00000534546 1544 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 AC027682.1-201ENST00000562846 899 ntBASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 AL355001.2-201ENST00000620617 1191 ntBASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TRAV2A0A0B4J234 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
TRAV2A0A0B4J234 C1orf229-201ENST00000623686 2258 ntBASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
TRAV2A0A0B4J234 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms