Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.8■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 AC026271.2-201ENST00000428091 497 ntBASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 AC010141.3-201ENST00000456659 717 ntBASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 AC137767.1-201ENST00000602918 1920 ntBASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
TNFSF12-TNFSF13A0A0A6YY99 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 GUSBP5-202ENST00000510805 1989 ntBASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AC126544.1-201ENST00000580842 1059 ntBASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 IRS3P-201ENST00000223076 1006 ntBASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AC079089.2-201ENST00000531211 1277 ntBASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AC242852.2-201ENST00000615738 1807 ntBASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AL117328.2-201ENST00000624617 1940 ntBASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 AC080038.3-201ENST00000623346 1952 ntBASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
TNFSF12-TNFSF13A0A0A6YY99 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms