Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 AL137060.1-201ENST00000618151 2648 ntBASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 GUSBP5-201ENST00000418136 578 ntBASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 AC241377.3-202ENST00000626088 1088 ntBASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 AC241585.3-202ENST00000628937 1088 ntBASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 AC245100.8-202ENST00000629247 1058 ntBASIC19.69■□□□□ 0.74
TRAV27A0A087WT01 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 AC010542.4-201ENST00000563151 1910 ntBASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV27A0A087WT01 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV27A0A087WT01 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 AC133637.1-201ENST00000624115 1537 ntBASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 AL356740.2-201ENST00000601559 647 ntBASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 AC099791.2-201ENST00000605725 427 ntBASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 pRNA.6-201ENST00000610482 90 ntBASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 pRNA.5-201ENST00000612139 90 ntBASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 pRNA.11-201ENST00000618423 90 ntBASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 pRNA.13-201ENST00000619112 90 ntBASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV27A0A087WT01 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 FAM99A-202ENST00000538190 1989 ntBASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV27A0A087WT01 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.64■□□□□ 0.74
TRAV27A0A087WT01 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV27A0A087WT01 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV27A0A087WT01 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAV27A0A087WT01 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV27A0A087WT01 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV27A0A087WT01 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV27A0A087WT01 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.64■□□□□ 0.73
TRAV27A0A087WT01 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV27A0A087WT01 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.63■□□□□ 0.73
TRAV27A0A087WT01 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms