Protein–RNA interactions for Protein: A0A075B6N2

TRBV20-1, T-cell receptor beta variable 20-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1A0A075B6N2 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 H19-210ENST00000439725 1929 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 AL161729.1-201ENST00000604104 1402 ntBASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TRBV20-1A0A075B6N2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 AC090340.1-201ENST00000620778 4980 ntBASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRBV20-1A0A075B6N2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 KLF16-203ENST00000592313 508 ntTSL 3 BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 HCG11-201ENST00000411553 5696 ntBASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.53□□□□□ -0.08
TRBV20-1A0A075B6N2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TRBV20-1A0A075B6N2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TRBV20-1A0A075B6N2 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC14.52□□□□□ -0.08
TRBV20-1A0A075B6N2 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC14.52□□□□□ -0.08
TRBV20-1A0A075B6N2 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
TRBV20-1A0A075B6N2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 BX323043.1-201ENST00000641006 1765 ntBASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TRBV20-1A0A075B6N2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TRBV20-1A0A075B6N2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC14.5□□□□□ -0.09
TRBV20-1A0A075B6N2 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms