Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 MIR4722-201ENST00000578292 60 ntBASIC13.15□□□□□ -0.3
SLC1A1P43005 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 AL078590.3-201ENST00000607531 750 ntTSL 3 BASIC13.15□□□□□ -0.3
SLC1A1P43005 AC006158.1-201ENST00000610661 249 ntBASIC13.15□□□□□ -0.3
SLC1A1P43005 MAP3K14-205ENST00000617331 1049 ntTSL 5 BASIC13.15□□□□□ -0.3
SLC1A1P43005 CARS-202ENST00000380525 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 RFC5-201ENST00000392542 2449 ntTSL 2 BASIC13.15□□□□□ -0.3
SLC1A1P43005 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 LPP-AS2-201ENST00000605573 2852 ntBASIC13.15□□□□□ -0.3
SLC1A1P43005 ERGIC3-202ENST00000348547 1359 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SLC1A1P43005 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 ALDH3B2-204ENST00000530069 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 CDKL2-201ENST00000307465 2565 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SLC1A1P43005 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SLC1A1P43005 OSBPL9-207ENST00000462759 2755 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SLC1A1P43005 FOXO4-202ENST00000374259 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SLC1A1P43005 ANKRD42-203ENST00000393392 2302 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC1A1P43005 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 FOLR1-203ENST00000393679 1331 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 CTLA4-202ENST00000302823 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 AC092902.5-201ENST00000641650 3256 ntBASIC13.14□□□□□ -0.31
SLC1A1P43005 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 MRVI1-215ENST00000541483 2468 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC1A1P43005 NF2-204ENST00000361166 1837 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 NRAP-201ENST00000359988 5580 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 SRP68-212ENST00000602720 2037 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC1A1P43005 FAM157A-203ENST00000634862 6083 ntTSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 KHDC1L-201ENST00000370388 635 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC1A1P43005 RN7SL684P-201ENST00000465665 294 ntBASIC13.14□□□□□ -0.31
SLC1A1P43005 AC093700.1-201ENST00000503348 717 ntBASIC13.14□□□□□ -0.31
SLC1A1P43005 NT5CP1-201ENST00000554092 509 ntBASIC13.14□□□□□ -0.31
SLC1A1P43005 SALL1-204ENST00000566102 565 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 MIR4539-201ENST00000579784 60 ntBASIC13.14□□□□□ -0.31
SLC1A1P43005 AC022146.2-201ENST00000605980 348 ntTSL 3 BASIC13.14□□□□□ -0.31
SLC1A1P43005 PACRG-AS3-204ENST00000620150 567 ntTSL 4 BASIC13.14□□□□□ -0.31
SLC1A1P43005 AC148477.9-201ENST00000623974 539 ntBASIC13.14□□□□□ -0.31
SLC1A1P43005 NMT1-213ENST00000592782 4999 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 JPT2-206ENST00000562684 3185 ntTSL 2 BASIC13.14□□□□□ -0.31
SLC1A1P43005 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 CIITA-212ENST00000618207 2844 ntTSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 TSEN2-204ENST00000415684 2279 ntTSL 5 BASIC13.14□□□□□ -0.31
SLC1A1P43005 MVK-213ENST00000625889 2591 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 GNG11-201ENST00000248564 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 SCNN1D-202ENST00000338555 3475 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
SLC1A1P43005 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SLC1A1P43005 ALLC-201ENST00000252505 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 LINC01973-201ENST00000374983 4678 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC1A1P43005 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 AP000821.1-201ENST00000567082 1909 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 ATIC-201ENST00000236959 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
SLC1A1P43005 C1S-221ENST00000617865 2844 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 GSN-205ENST00000373823 3341 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 AC005906.2-201ENST00000640877 3408 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 NPSR1-209ENST00000531252 1377 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 NSA2-201ENST00000296802 1199 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 CHMP2A-201ENST00000312547 913 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 OBP2A-202ENST00000342114 607 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 AC234644.1-201ENST00000406065 370 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 AP000343.1-201ENST00000440602 385 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.13□□□□□ -0.31
SLC1A1P43005 RNU1-80P-201ENST00000459500 161 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 YBX1P3-201ENST00000468366 909 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 NUDT9P1-201ENST00000477230 745 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 CMC2-202ENST00000486645 766 ntTSL 3 BASIC13.13□□□□□ -0.31
SLC1A1P43005 AL139807.1-201ENST00000500636 704 ntTSL 3 BASIC13.13□□□□□ -0.31
SLC1A1P43005 AC233724.9-201ENST00000511694 407 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC13.13□□□□□ -0.31
SLC1A1P43005 IGHEP1-201ENST00000521393 651 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 Z93930.2-203ENST00000585003 516 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 AC092327.1-201ENST00000596612 744 ntBASIC13.13□□□□□ -0.31
SLC1A1P43005 CHMP2A-206ENST00000600118 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
SLC1A1P43005 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC13.13□□□□□ -0.31
SLC1A1P43005 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms