Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.88■■■□□ 2.05
RTCBQ9Y3I0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 AC007322.1-201ENST00000426983 750 ntBASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 KLF13-207ENST00000560473 489 ntTSL 3 BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 AC005181.1-201ENST00000604782 1256 ntBASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC27.87■■■□□ 2.05
RTCBQ9Y3I0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC27.86■■■□□ 2.05
RTCBQ9Y3I0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC27.86■■■□□ 2.05
RTCBQ9Y3I0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTCBQ9Y3I0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC27.86■■■□□ 2.05
RTCBQ9Y3I0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC27.86■■■□□ 2.05
RTCBQ9Y3I0 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTCBQ9Y3I0 KRT87P-202ENST00000534226 1464 ntBASIC27.86■■■□□ 2.05
RTCBQ9Y3I0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
RTCBQ9Y3I0 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
RTCBQ9Y3I0 AC005224.4-201ENST00000583262 1652 ntBASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 AL138781.1-201ENST00000566567 1274 ntBASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 AC142381.3-201ENST00000568208 1670 ntBASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC27.84■■■□□ 2.05
RTCBQ9Y3I0 AL353803.4-201ENST00000565882 1934 ntBASIC27.83■■■□□ 2.05
RTCBQ9Y3I0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC27.83■■■□□ 2.05
RTCBQ9Y3I0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC27.83■■■□□ 2.05
RTCBQ9Y3I0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC27.83■■■□□ 2.05
RTCBQ9Y3I0 UBE2DNL-204ENST00000602536 740 ntBASIC27.83■■■□□ 2.05
RTCBQ9Y3I0 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC27.83■■■□□ 2.05
RTCBQ9Y3I0 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
RTCBQ9Y3I0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
RTCBQ9Y3I0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RTCBQ9Y3I0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RTCBQ9Y3I0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RTCBQ9Y3I0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC27.82■■■□□ 2.04
RTCBQ9Y3I0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC27.82■■■□□ 2.04
RTCBQ9Y3I0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
RTCBQ9Y3I0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC27.82■■■□□ 2.04
RTCBQ9Y3I0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC27.82■■■□□ 2.04
RTCBQ9Y3I0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 SLC29A4P1-201ENST00000398760 971 ntBASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 EED-207ENST00000528180 1745 ntTSL 5 BASIC27.81■■■□□ 2.04
RTCBQ9Y3I0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 RGMA-211ENST00000557420 989 ntTSL 3 BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 AC009237.3-201ENST00000393279 1427 ntBASIC27.8■■■□□ 2.04
RTCBQ9Y3I0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RTCBQ9Y3I0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC27.79■■■□□ 2.04
RTCBQ9Y3I0 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RTCBQ9Y3I0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC27.79■■■□□ 2.04
RTCBQ9Y3I0 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
RTCBQ9Y3I0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
RTCBQ9Y3I0 MIR4651-201ENST00000582622 73 ntBASIC27.79■■■□□ 2.04
RTCBQ9Y3I0 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
RTCBQ9Y3I0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
RTCBQ9Y3I0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms