Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 AL499627.2-201ENST00000606283 725 ntBASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RNF11Q9Y3C5 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.24■□□□□ 0.99
RNF11Q9Y3C5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 AC006455.2-201ENST00000429931 906 ntBASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 AC241377.3-202ENST00000626088 1088 ntBASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 AC241585.3-202ENST00000628937 1088 ntBASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 AC245100.8-202ENST00000629247 1058 ntBASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RNF11Q9Y3C5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 AC092053.2-201ENST00000640557 1818 ntBASIC21.22■□□□□ 0.99
RNF11Q9Y3C5 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 AC099791.2-201ENST00000605725 427 ntBASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RNF11Q9Y3C5 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 AL356441.2-201ENST00000443009 864 ntBASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RNF11Q9Y3C5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.19■□□□□ 0.98
RNF11Q9Y3C5 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms