Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC31.68■■■□□ 2.66
STAG3Q9UJ98 KLF13-207ENST00000560473 489 ntTSL 3 BASIC31.68■■■□□ 2.66
STAG3Q9UJ98 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC31.68■■■□□ 2.66
STAG3Q9UJ98 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC31.68■■■□□ 2.66
STAG3Q9UJ98 AC005181.1-201ENST00000604782 1256 ntBASIC31.68■■■□□ 2.66
STAG3Q9UJ98 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
STAG3Q9UJ98 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC31.68■■■□□ 2.66
STAG3Q9UJ98 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC31.67■■■□□ 2.66
STAG3Q9UJ98 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC31.67■■■□□ 2.66
STAG3Q9UJ98 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC31.67■■■□□ 2.66
STAG3Q9UJ98 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC31.67■■■□□ 2.66
STAG3Q9UJ98 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
STAG3Q9UJ98 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC31.67■■■□□ 2.66
STAG3Q9UJ98 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
STAG3Q9UJ98 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
STAG3Q9UJ98 DUX4L16-201ENST00000555130 1264 ntBASIC31.66■■■□□ 2.66
STAG3Q9UJ98 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC31.66■■■□□ 2.66
STAG3Q9UJ98 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.66■■■□□ 2.66
STAG3Q9UJ98 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
STAG3Q9UJ98 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 SLC7A5P2-201ENST00000553010 536 ntBASIC31.65■■■□□ 2.66
STAG3Q9UJ98 AL138781.1-201ENST00000566567 1274 ntBASIC31.65■■■□□ 2.66
STAG3Q9UJ98 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
STAG3Q9UJ98 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
STAG3Q9UJ98 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC31.64■■■□□ 2.66
STAG3Q9UJ98 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
STAG3Q9UJ98 PARP1-202ENST00000366792 553 ntTSL 3 BASIC31.64■■■□□ 2.66
STAG3Q9UJ98 SLC29A4P1-201ENST00000398760 971 ntBASIC31.64■■■□□ 2.66
STAG3Q9UJ98 METTL15-202ENST00000403099 795 ntTSL 5 BASIC31.64■■■□□ 2.66
STAG3Q9UJ98 GUSBP6-202ENST00000438529 1198 ntBASIC31.64■■■□□ 2.66
STAG3Q9UJ98 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC31.64■■■□□ 2.66
STAG3Q9UJ98 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
STAG3Q9UJ98 TFG-210ENST00000620299 1289 ntTSL 5 BASIC31.64■■■□□ 2.66
STAG3Q9UJ98 KRT87P-202ENST00000534226 1464 ntBASIC31.64■■■□□ 2.66
STAG3Q9UJ98 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC31.63■■■□□ 2.65
STAG3Q9UJ98 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
STAG3Q9UJ98 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC31.63■■■□□ 2.65
STAG3Q9UJ98 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.63■■■□□ 2.65
STAG3Q9UJ98 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
STAG3Q9UJ98 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.63■■■□□ 2.65
STAG3Q9UJ98 AC138932.3-201ENST00000567634 1902 ntBASIC31.63■■■□□ 2.65
STAG3Q9UJ98 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
STAG3Q9UJ98 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC31.62■■■□□ 2.65
STAG3Q9UJ98 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
STAG3Q9UJ98 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
STAG3Q9UJ98 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC31.62■■■□□ 2.65
STAG3Q9UJ98 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
STAG3Q9UJ98 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.62■■■□□ 2.65
STAG3Q9UJ98 OAS3-207ENST00000551007 998 ntTSL 2 BASIC31.62■■■□□ 2.65
STAG3Q9UJ98 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.62■■■□□ 2.65
STAG3Q9UJ98 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC31.61■■■□□ 2.65
STAG3Q9UJ98 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
STAG3Q9UJ98 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
STAG3Q9UJ98 UBE2DNL-204ENST00000602536 740 ntBASIC31.61■■■□□ 2.65
STAG3Q9UJ98 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC31.61■■■□□ 2.65
STAG3Q9UJ98 AC005224.4-201ENST00000583262 1652 ntBASIC31.6■■■□□ 2.65
STAG3Q9UJ98 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 MIR4651-201ENST00000582622 73 ntBASIC31.6■■■□□ 2.65
STAG3Q9UJ98 USP45-205ENST00000472914 1617 ntTSL 5 BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
STAG3Q9UJ98 AL353803.4-201ENST00000565882 1934 ntBASIC31.59■■■□□ 2.65
STAG3Q9UJ98 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 RGMA-211ENST00000557420 989 ntTSL 3 BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
STAG3Q9UJ98 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
STAG3Q9UJ98 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC31.58■■■□□ 2.65
STAG3Q9UJ98 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC31.58■■■□□ 2.65
STAG3Q9UJ98 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
STAG3Q9UJ98 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC31.58■■■□□ 2.65
STAG3Q9UJ98 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC31.57■■■□□ 2.64
STAG3Q9UJ98 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
STAG3Q9UJ98 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
STAG3Q9UJ98 FAM201B-201ENST00000458407 597 ntBASIC31.57■■■□□ 2.64
STAG3Q9UJ98 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
STAG3Q9UJ98 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC31.57■■■□□ 2.64
STAG3Q9UJ98 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
STAG3Q9UJ98 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
STAG3Q9UJ98 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms