Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN1Q9P244 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.04■□□□□ 0.8
LRFN1Q9P244 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
LRFN1Q9P244 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.04■□□□□ 0.8
LRFN1Q9P244 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN1Q9P244 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN1Q9P244 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN1Q9P244 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.04■□□□□ 0.8
LRFN1Q9P244 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.04■□□□□ 0.8
LRFN1Q9P244 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
LRFN1Q9P244 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.04■□□□□ 0.8
LRFN1Q9P244 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LRFN1Q9P244 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.03■□□□□ 0.8
LRFN1Q9P244 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.03■□□□□ 0.8
LRFN1Q9P244 OXCT2P1-201ENST00000447263 1535 ntBASIC20.03■□□□□ 0.8
LRFN1Q9P244 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
LRFN1Q9P244 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.03■□□□□ 0.8
LRFN1Q9P244 AC022517.1-201ENST00000592429 346 ntBASIC20.03■□□□□ 0.8
LRFN1Q9P244 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
LRFN1Q9P244 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.03■□□□□ 0.8
LRFN1Q9P244 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LRFN1Q9P244 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRFN1Q9P244 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRFN1Q9P244 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRFN1Q9P244 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRFN1Q9P244 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.02■□□□□ 0.8
LRFN1Q9P244 NTF6G-201ENST00000591094 616 ntBASIC20.02■□□□□ 0.8
LRFN1Q9P244 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
LRFN1Q9P244 DUSP8P3-201ENST00000399571 1760 ntBASIC20.02■□□□□ 0.8
LRFN1Q9P244 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRFN1Q9P244 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRFN1Q9P244 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRFN1Q9P244 BX005040.4-201ENST00000637145 1518 ntBASIC20.02■□□□□ 0.79
LRFN1Q9P244 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRFN1Q9P244 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRFN1Q9P244 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
LRFN1Q9P244 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.01■□□□□ 0.79
LRFN1Q9P244 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LRFN1Q9P244 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.01■□□□□ 0.79
LRFN1Q9P244 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.01■□□□□ 0.79
LRFN1Q9P244 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRFN1Q9P244 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN1Q9P244 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20■□□□□ 0.79
LRFN1Q9P244 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20■□□□□ 0.79
LRFN1Q9P244 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
LRFN1Q9P244 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN1Q9P244 SMUG1P1-201ENST00000590640 811 ntBASIC20■□□□□ 0.79
LRFN1Q9P244 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN1Q9P244 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20■□□□□ 0.79
LRFN1Q9P244 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRFN1Q9P244 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20■□□□□ 0.79
LRFN1Q9P244 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRFN1Q9P244 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
LRFN1Q9P244 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
LRFN1Q9P244 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.99■□□□□ 0.79
LRFN1Q9P244 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.99■□□□□ 0.79
LRFN1Q9P244 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LRFN1Q9P244 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
LRFN1Q9P244 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRFN1Q9P244 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
LRFN1Q9P244 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN1Q9P244 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN1Q9P244 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRFN1Q9P244 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.98■□□□□ 0.79
LRFN1Q9P244 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC19.98■□□□□ 0.79
LRFN1Q9P244 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.98■□□□□ 0.79
LRFN1Q9P244 TPRG1LP1-201ENST00000598702 760 ntBASIC19.98■□□□□ 0.79
LRFN1Q9P244 IKBKGP1-201ENST00000612193 1073 ntBASIC19.98■□□□□ 0.79
LRFN1Q9P244 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LRFN1Q9P244 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
LRFN1Q9P244 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LRFN1Q9P244 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms