Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3BQ9NW08 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3BQ9NW08 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
POLR3BQ9NW08 AC092068.2-201ENST00000590491 1708 ntBASIC22.51■■□□□ 1.19
POLR3BQ9NW08 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.51■■□□□ 1.19
POLR3BQ9NW08 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
POLR3BQ9NW08 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 DUX4L4-201ENST00000566884 1269 ntBASIC22.5■■□□□ 1.19
POLR3BQ9NW08 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 AC105233.4-201ENST00000642045 216 ntBASIC22.5■■□□□ 1.19
POLR3BQ9NW08 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
POLR3BQ9NW08 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
POLR3BQ9NW08 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 HLA-L-209ENST00000420110 1011 ntBASIC22.48■■□□□ 1.19
POLR3BQ9NW08 AP005435.1-201ENST00000529293 1178 ntBASIC22.48■■□□□ 1.19
POLR3BQ9NW08 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.48■■□□□ 1.19
POLR3BQ9NW08 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.47■■□□□ 1.19
POLR3BQ9NW08 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
POLR3BQ9NW08 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC22.47■■□□□ 1.19
POLR3BQ9NW08 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.47■■□□□ 1.19
POLR3BQ9NW08 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.47■■□□□ 1.19
POLR3BQ9NW08 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.47■■□□□ 1.19
POLR3BQ9NW08 C9orf163-202ENST00000624034 2573 ntBASIC22.46■■□□□ 1.19
POLR3BQ9NW08 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 MPST-204ENST00000404393 1329 ntTSL 5 BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 FP325331.1-202ENST00000623531 1380 ntBASIC22.46■■□□□ 1.19
POLR3BQ9NW08 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.46■■□□□ 1.19
POLR3BQ9NW08 AC012676.1-201ENST00000574705 1949 ntBASIC22.45■■□□□ 1.18
POLR3BQ9NW08 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3BQ9NW08 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
POLR3BQ9NW08 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.45■■□□□ 1.18
POLR3BQ9NW08 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3BQ9NW08 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3BQ9NW08 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3BQ9NW08 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
POLR3BQ9NW08 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3BQ9NW08 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3BQ9NW08 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3BQ9NW08 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC22.44■■□□□ 1.18
POLR3BQ9NW08 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC22.44■■□□□ 1.18
POLR3BQ9NW08 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3BQ9NW08 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3BQ9NW08 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
POLR3BQ9NW08 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms