Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM9Q9NQV7 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
PRDM9Q9NQV7 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM9Q9NQV7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.63■□□□□ 0.89
PRDM9Q9NQV7 AC105265.2-201ENST00000467189 838 ntBASIC20.63■□□□□ 0.89
PRDM9Q9NQV7 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM9Q9NQV7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PRDM9Q9NQV7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 AC133561.1-201ENST00000568600 2415 ntBASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 AC242852.2-201ENST00000615738 1807 ntBASIC20.62■□□□□ 0.89
PRDM9Q9NQV7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 AL117328.2-201ENST00000624617 1940 ntBASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM9Q9NQV7 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 IGHV3-19-201ENST00000521488 291 ntBASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 ECEL1P1-201ENST00000373592 1742 ntBASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PRDM9Q9NQV7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 AC087239.1-201ENST00000622671 572 ntBASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PRDM9Q9NQV7 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 TSPY26P-201ENST00000476365 1326 ntBASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 GUSBP5-202ENST00000510805 1989 ntBASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
PRDM9Q9NQV7 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PRDM9Q9NQV7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PRDM9Q9NQV7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.57■□□□□ 0.88
PRDM9Q9NQV7 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 ZNRF2P3-201ENST00000424200 374 ntBASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.56■□□□□ 0.88
PRDM9Q9NQV7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms