Protein–RNA interactions for Protein: Q9NQT6

FSCN3, Fascin-3, humanhuman

Predictions only

Length 498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FSCN3Q9NQT6 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 MIR4651-201ENST00000582622 73 ntBASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 AC087239.1-201ENST00000622671 572 ntBASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
FSCN3Q9NQT6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 AL353803.4-201ENST00000565882 1934 ntBASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 GUSBP6-202ENST00000438529 1198 ntBASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 TSPY6P-201ENST00000448518 926 ntBASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 AC068587.7-201ENST00000641602 218 ntBASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
FSCN3Q9NQT6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 AC142381.3-201ENST00000568208 1670 ntBASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 KRT18P6-201ENST00000555540 1265 ntBASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
FSCN3Q9NQT6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
FSCN3Q9NQT6 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.47■■□□□ 1.03
FSCN3Q9NQT6 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FSCN3Q9NQT6 UBE2DNL-204ENST00000602536 740 ntBASIC21.47■■□□□ 1.03
FSCN3Q9NQT6 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.47■■□□□ 1.03
FSCN3Q9NQT6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
FSCN3Q9NQT6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FSCN3Q9NQT6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
FSCN3Q9NQT6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 OXCT2P1-201ENST00000447263 1535 ntBASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 DUX4L16-201ENST00000555130 1264 ntBASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 AC005181.1-201ENST00000604782 1256 ntBASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.46■■□□□ 1.03
FSCN3Q9NQT6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
FSCN3Q9NQT6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 SLC7A5P2-201ENST00000553010 536 ntBASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.45■■□□□ 1.02
FSCN3Q9NQT6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
FSCN3Q9NQT6 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC21.43■■□□□ 1.02
FSCN3Q9NQT6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms