Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 AL050303.2-201ENST00000619798 666 ntBASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 H19-210ENST00000439725 1929 ntTSL 2 BASIC23.55■■□□□ 1.36
RC3H2Q9HBD1 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H2Q9HBD1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC23.54■■□□□ 1.36
RC3H2Q9HBD1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H2Q9HBD1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC23.54■■□□□ 1.36
RC3H2Q9HBD1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H2Q9HBD1 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H2Q9HBD1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
RC3H2Q9HBD1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 AC004812.2-201ENST00000611079 2094 ntBASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 GPX1P1-201ENST00000388829 606 ntBASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
RC3H2Q9HBD1 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H2Q9HBD1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.52■■□□□ 1.36
RC3H2Q9HBD1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.52■■□□□ 1.36
RC3H2Q9HBD1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.52■■□□□ 1.36
RC3H2Q9HBD1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.52■■□□□ 1.36
RC3H2Q9HBD1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
RC3H2Q9HBD1 AC005224.4-201ENST00000583262 1652 ntBASIC23.51■■□□□ 1.35
RC3H2Q9HBD1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H2Q9HBD1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
RC3H2Q9HBD1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
RC3H2Q9HBD1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC23.51■■□□□ 1.35
RC3H2Q9HBD1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.51■■□□□ 1.35
RC3H2Q9HBD1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.51■■□□□ 1.35
RC3H2Q9HBD1 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
RC3H2Q9HBD1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RC3H2Q9HBD1 GUSBP6-202ENST00000438529 1198 ntBASIC23.5■■□□□ 1.35
RC3H2Q9HBD1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RC3H2Q9HBD1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
RC3H2Q9HBD1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 KRT87P-202ENST00000534226 1464 ntBASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 AC104187.1-201ENST00000607510 612 ntBASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
RC3H2Q9HBD1 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 DUSP8P3-201ENST00000399571 1760 ntBASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 AC020928.2-201ENST00000588717 2197 ntBASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RC3H2Q9HBD1 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 DUX4L16-201ENST00000555130 1264 ntBASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 AL139125.2-201ENST00000623134 1869 ntBASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RC3H2Q9HBD1 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 LINC01124-201ENST00000409786 2117 ntBASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 SLC7A5P2-201ENST00000553010 536 ntBASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.46■■□□□ 1.35
RC3H2Q9HBD1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
RC3H2Q9HBD1 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H2Q9HBD1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H2Q9HBD1 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H2Q9HBD1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.45■■□□□ 1.34
RC3H2Q9HBD1 TSPY6P-201ENST00000448518 926 ntBASIC23.45■■□□□ 1.34
RC3H2Q9HBD1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
RC3H2Q9HBD1 AL121832.2-201ENST00000610979 668 ntBASIC23.45■■□□□ 1.34
RC3H2Q9HBD1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms