Protein–RNA interactions for Protein: Q9H7J1

PPP1R3E, Protein phosphatase 1 regulatory subunit 3E, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3EQ9H7J1 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PPP1R3EQ9H7J1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.3■□□□□ 0.68
PPP1R3EQ9H7J1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 MIR6722-201ENST00000617286 78 ntBASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.29■□□□□ 0.68
PPP1R3EQ9H7J1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 AC010542.4-201ENST00000563151 1910 ntBASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PPP1R3EQ9H7J1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC19.27■□□□□ 0.68
PPP1R3EQ9H7J1 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PPP1R3EQ9H7J1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPP1R3EQ9H7J1 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PPP1R3EQ9H7J1 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.27■□□□□ 0.68
PPP1R3EQ9H7J1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PPP1R3EQ9H7J1 AL035685.1-201ENST00000636663 812 ntBASIC19.27■□□□□ 0.68
PPP1R3EQ9H7J1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PPP1R3EQ9H7J1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.27■□□□□ 0.67
PPP1R3EQ9H7J1 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
PPP1R3EQ9H7J1 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
PPP1R3EQ9H7J1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 UNC93B8-201ENST00000511903 705 ntBASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PPP1R3EQ9H7J1 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 AC087742.1-201ENST00000575880 1738 ntBASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 AC005703.6-201ENST00000623265 1329 ntBASIC19.25■□□□□ 0.67
PPP1R3EQ9H7J1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 AL353803.4-201ENST00000565882 1934 ntBASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 MTDHP2-201ENST00000601468 714 ntBASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.24■□□□□ 0.67
PPP1R3EQ9H7J1 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PPP1R3EQ9H7J1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms