Protein–RNA interactions for Protein: Q9H649

NSUN3, tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial, humanhuman

Known RBP Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN3Q9H649 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.27■■□□□ 1.32
NSUN3Q9H649 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC23.27■■□□□ 1.32
NSUN3Q9H649 MED17-227ENST00000640521 2047 ntTSL 5 BASIC23.26■■□□□ 1.31
NSUN3Q9H649 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NSUN3Q9H649 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NSUN3Q9H649 AC142381.3-201ENST00000568208 1670 ntBASIC23.26■■□□□ 1.31
NSUN3Q9H649 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NSUN3Q9H649 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.26■■□□□ 1.31
NSUN3Q9H649 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.26■■□□□ 1.31
NSUN3Q9H649 AC005181.1-201ENST00000604782 1256 ntBASIC23.26■■□□□ 1.31
NSUN3Q9H649 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NSUN3Q9H649 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
NSUN3Q9H649 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NSUN3Q9H649 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.25■■□□□ 1.31
NSUN3Q9H649 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 SLC29A4P1-201ENST00000398760 971 ntBASIC23.25■■□□□ 1.31
NSUN3Q9H649 METTL15-202ENST00000403099 795 ntTSL 5 BASIC23.25■■□□□ 1.31
NSUN3Q9H649 AC007322.1-201ENST00000426983 750 ntBASIC23.25■■□□□ 1.31
NSUN3Q9H649 FAM201B-201ENST00000458407 597 ntBASIC23.25■■□□□ 1.31
NSUN3Q9H649 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 OAS3-207ENST00000551007 998 ntTSL 2 BASIC23.25■■□□□ 1.31
NSUN3Q9H649 AL138781.1-201ENST00000566567 1274 ntBASIC23.25■■□□□ 1.31
NSUN3Q9H649 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.25■■□□□ 1.31
NSUN3Q9H649 MIR4651-201ENST00000582622 73 ntBASIC23.25■■□□□ 1.31
NSUN3Q9H649 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
NSUN3Q9H649 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
NSUN3Q9H649 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.25■■□□□ 1.31
NSUN3Q9H649 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NSUN3Q9H649 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NSUN3Q9H649 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NSUN3Q9H649 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NSUN3Q9H649 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
NSUN3Q9H649 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NSUN3Q9H649 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC23.24■■□□□ 1.31
NSUN3Q9H649 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.24■■□□□ 1.31
NSUN3Q9H649 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NSUN3Q9H649 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NSUN3Q9H649 AC138932.3-201ENST00000567634 1902 ntBASIC23.23■■□□□ 1.31
NSUN3Q9H649 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NSUN3Q9H649 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NSUN3Q9H649 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
NSUN3Q9H649 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
NSUN3Q9H649 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.23■■□□□ 1.31
NSUN3Q9H649 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
NSUN3Q9H649 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
NSUN3Q9H649 DUX4L16-201ENST00000555130 1264 ntBASIC23.23■■□□□ 1.31
NSUN3Q9H649 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.23■■□□□ 1.31
NSUN3Q9H649 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC23.23■■□□□ 1.31
NSUN3Q9H649 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
NSUN3Q9H649 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.22■■□□□ 1.31
NSUN3Q9H649 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NSUN3Q9H649 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NSUN3Q9H649 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC23.22■■□□□ 1.31
NSUN3Q9H649 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.22■■□□□ 1.31
NSUN3Q9H649 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC23.22■■□□□ 1.31
NSUN3Q9H649 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NSUN3Q9H649 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NSUN3Q9H649 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.22■■□□□ 1.31
NSUN3Q9H649 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NSUN3Q9H649 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
NSUN3Q9H649 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NSUN3Q9H649 AC004687.1-201ENST00000579003 1625 ntBASIC23.21■■□□□ 1.31
NSUN3Q9H649 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
NSUN3Q9H649 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC23.2■■□□□ 1.3
NSUN3Q9H649 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NSUN3Q9H649 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.2■■□□□ 1.3
NSUN3Q9H649 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC23.2■■□□□ 1.3
NSUN3Q9H649 AC104187.1-201ENST00000607510 612 ntBASIC23.2■■□□□ 1.3
NSUN3Q9H649 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
NSUN3Q9H649 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN3Q9H649 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.19■■□□□ 1.3
NSUN3Q9H649 AC069152.1-201ENST00000438030 544 ntBASIC23.19■■□□□ 1.3
NSUN3Q9H649 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN3Q9H649 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN3Q9H649 AC093827.2-201ENST00000512654 315 ntBASIC23.19■■□□□ 1.3
NSUN3Q9H649 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
NSUN3Q9H649 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC23.19■■□□□ 1.3
NSUN3Q9H649 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN3Q9H649 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC23.19■■□□□ 1.3
NSUN3Q9H649 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN3Q9H649 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NSUN3Q9H649 AP003733.4-201ENST00000623785 1697 ntBASIC23.19■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms