Protein–RNA interactions for Protein: Q9BV44

THUMPD3, THUMP domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3Q9BV44 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
THUMPD3Q9BV44 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.78■□□□□ 0.92
THUMPD3Q9BV44 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD3Q9BV44 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD3Q9BV44 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD3Q9BV44 AC092028.1-203ENST00000608262 953 ntBASIC20.78■□□□□ 0.92
THUMPD3Q9BV44 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD3Q9BV44 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
THUMPD3Q9BV44 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
THUMPD3Q9BV44 LINC01960-201ENST00000563759 1884 ntBASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
THUMPD3Q9BV44 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
THUMPD3Q9BV44 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
THUMPD3Q9BV44 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 AL035685.1-201ENST00000636663 812 ntBASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
THUMPD3Q9BV44 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 MIR6722-201ENST00000617286 78 ntBASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 AC009086.3-201ENST00000623486 1008 ntBASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
THUMPD3Q9BV44 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
THUMPD3Q9BV44 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
THUMPD3Q9BV44 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms