Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A7Q99884 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A7Q99884 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A7Q99884 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A7Q99884 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A7Q99884 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A7Q99884 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.94■□□□□ 0.62
SLC6A7Q99884 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC6A7Q99884 AC005837.3-201ENST00000612163 286 ntBASIC18.94■□□□□ 0.62
SLC6A7Q99884 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A7Q99884 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC6A7Q99884 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLC6A7Q99884 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A7Q99884 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
SLC6A7Q99884 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC6A7Q99884 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC6A7Q99884 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SLC6A7Q99884 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SLC6A7Q99884 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC6A7Q99884 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.93■□□□□ 0.62
SLC6A7Q99884 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC6A7Q99884 AL022069.1-201ENST00000568025 1636 ntBASIC18.92■□□□□ 0.62
SLC6A7Q99884 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A7Q99884 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC6A7Q99884 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC6A7Q99884 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.92■□□□□ 0.62
SLC6A7Q99884 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A7Q99884 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC6A7Q99884 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC6A7Q99884 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SLC6A7Q99884 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A7Q99884 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.91■□□□□ 0.62
SLC6A7Q99884 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SLC6A7Q99884 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC6A7Q99884 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC6A7Q99884 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC6A7Q99884 C11orf96-202ENST00000528572 1834 ntBASIC18.9■□□□□ 0.62
SLC6A7Q99884 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 AC139530.1-201ENST00000575312 1977 ntBASIC18.9■□□□□ 0.62
SLC6A7Q99884 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.9■□□□□ 0.62
SLC6A7Q99884 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.9■□□□□ 0.62
SLC6A7Q99884 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SLC6A7Q99884 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A7Q99884 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.9■□□□□ 0.62
SLC6A7Q99884 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
SLC6A7Q99884 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SLC6A7Q99884 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SLC6A7Q99884 ALDH1A3-203ENST00000557963 1670 ntBASIC18.89■□□□□ 0.61
SLC6A7Q99884 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 AC092053.2-201ENST00000640557 1818 ntBASIC18.89■□□□□ 0.61
SLC6A7Q99884 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.89■□□□□ 0.61
SLC6A7Q99884 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SLC6A7Q99884 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SLC6A7Q99884 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A7Q99884 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A7Q99884 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A7Q99884 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A7Q99884 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SLC6A7Q99884 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SLC6A7Q99884 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms