Protein–RNA interactions for Protein: Q96EE3

SEH1L, Nucleoporin SEH1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1LQ96EE3 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 AL117332.1-201ENST00000622628 974 ntBASIC18.94■□□□□ 0.62
SEH1LQ96EE3 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SEH1LQ96EE3 AL353803.4-201ENST00000565882 1934 ntBASIC18.94■□□□□ 0.62
SEH1LQ96EE3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SEH1LQ96EE3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 AC009102.2-201ENST00000606772 1639 ntBASIC18.92■□□□□ 0.62
SEH1LQ96EE3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SEH1LQ96EE3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.91■□□□□ 0.62
SEH1LQ96EE3 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.91■□□□□ 0.62
SEH1LQ96EE3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SEH1LQ96EE3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SEH1LQ96EE3 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SEH1LQ96EE3 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SEH1LQ96EE3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 MIR3621-201ENST00000580529 85 ntBASIC18.89■□□□□ 0.61
SEH1LQ96EE3 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEH1LQ96EE3 AC087742.1-201ENST00000575880 1738 ntBASIC18.88■□□□□ 0.61
SEH1LQ96EE3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 AC026310.3-201ENST00000625186 2373 ntBASIC18.88■□□□□ 0.61
SEH1LQ96EE3 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 AL356740.2-201ENST00000601559 647 ntBASIC18.88■□□□□ 0.61
SEH1LQ96EE3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 AC131212.1-201ENST00000613771 668 ntBASIC18.88■□□□□ 0.61
SEH1LQ96EE3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.88■□□□□ 0.61
SEH1LQ96EE3 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms